Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_1358
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Entry
UMN798_1358 CDS
T01782
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UMN798_1358 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sef03400
]
UMN798_1358 (xthA)
Enzymes [BR:
sef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
UMN798_1358 (xthA)
DNA repair and recombination proteins [BR:
sef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UMN798_1358 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AFD58240
LinkDB
All DBs
Position
complement(1337870..1338676)
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AA seq
268 aa
AA seq
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MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL
KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER
CAETGIDYDIRSMEKPSDHAPVWATFRV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgcgcccgtccccatcagcttgaagcg
attgtcgaaaaacaccagcccgatgtgatcggtctacaggagacaaaagtccacgacgaa
atgttcccgctcgaagaggtcgcgaagctgggctataacgttttctatcatggacaaaag
ggccattacggcgtcgcgctgctaacaaaagccacgcccatttccgtcagacgcggtttc
ccggatgatggcgaagaggcgcaacgccgcattatcatggcggaaatcccctcgccgctg
ggtaatatcaccgtcattaacggctatttcccgcagggggaaagccgggatcatccgttg
aagttccccgcgaaagcgcagttttatcagaacttgcaaaactatcttgaaacggaactc
aagtgcgataatccggtattaattatgggcgacatgaatatcagcccgaccgatctggat
attggcatcggcgaagaaaaccgcaaacgctggctgcgtaccggtaaatgctccttcctg
ccggaggagcgtgaatggatgtcacggttactgaagtggggattagtggacacgttccgt
caggcgaatccgcaaacgatggataaattttcgtggtttgattaccgctcgaaaggtttc
gtggataatcgcgggctgcgtatcgacctcttgctggcaagcgctccgctggcggaacgt
tgcgcagaaaccggtatagactacgacattcgcagtatggaaaaaccctccgaccatgcg
ccggtctgggcgacgtttcgtgtttga
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