Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_1996
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Entry
UMN798_1996 CDS
T01782
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UMN798_1996 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sef03400
]
UMN798_1996 (ruvB)
Enzymes [BR:
sef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UMN798_1996 (ruvB)
DNA repair and recombination proteins [BR:
sef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UMN798_1996 (ruvB)
RecFOR pathway proteins
UMN798_1996 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
nSTAND3
AAA_14
Rad17
TIP49
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
AAA_28
AAA_24
NB-ARC
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AFD58798
LinkDB
All DBs
Position
complement(1945985..1946995)
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AA seq
336 aa
AA seq
DB search
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagatcgcctgatttcagcaggcgccacgatcgcagaagacgtcgccgat
cgcgccattcgcccgaagttattggcggaatatgtcggccaaccgcaggtgcgctcccag
atggagatctttattcaggcggcaaaacggcgtggcgacgcactagatcacttgctgatt
ttcggcccgccagggttaggtaaaacgactctggcgaatatcgttgccaatgaaatgggc
gtcaatctccgaaccacgtccggcccggtgctggaaaaagcaggcgatctggcggctatg
ctcaccaatcttgaaccgcatgatgtgctgtttattgatgagattcaccggctttcaccg
gtggtggaagaggtactctatccggcgatggaagattaccagttggatattatgattggc
gaagggcctgccgcacgttcaattaagatcgatctgccgccgtttacgctcattggcgcg
acgacgcgcgccgggtcgttaacgtccccgctacgtgaccgttttggtattgtgcagcgc
ctggagttctaccaggtgcccgatctgcagcacatcgttgggcgcagcgcaaggcacatg
gggcttgagatgagcgatgacggcgcgctggaagtggcgcgtcgggcgcgcggtacgccg
cgtatagccaaccgtctgctcagacgtgtgcgtgattttgctgaggtgaagcatgacggg
gctatttcagcggaaattgccgcgcaggcgctggatatgctgaacgtcgatgcggaaggg
tttgactatatggatcgcaagctgctgctggcggttattgataaattcttcggtggtccg
gtgggactggataacctggcggcggcgattggcgaagagcgtgaaaccattgaggatgtg
ctggagccgtatctgattcagcaaggctttttgcagcgtacgccgcgtgggcgtatggca
acggtgcgcgcctggaaccatttcgggatcacgccgccagagatgccttag
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