Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_1634
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Entry
SPUCDC_1634 CDS
T02824
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sega03016
]
SPUCDC_1634 (rnd)
Enzymes [BR:
sega01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SPUCDC_1634 (rnd)
Transfer RNA biogenesis [BR:
sega03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SPUCDC_1634 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGU64490
LinkDB
All DBs
Position
complement(1660224..1661339)
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AA seq
371 aa
AA seq
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MIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS
PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFAAMVEE
YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR
LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRIRKARERDMAVNFVVREENL
WAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYR
KAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELMAE
KLTLLLQEYPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgcgcatgtccggct
attgctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatc
cagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcg
ccgttaaaagcggtgttgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaa
gatctggaagtatttctgaatgcgtttggcgaactgccggagcccctgattgatacgcaa
attctggcggcgttttgcgggcgtccgctgtcgtgggggtttgcggcgatggtagaagag
tatacgggcgtggcgctggataaaagcgagtctcgtaccgactggttagcccggccttta
agcgaacgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaa
aagctgatgattgaaactgaagccgcaggatggctgcctgccgcgcttgatgaatgccga
ttgatgcagcagcgtcgtcaggagattcaggcgccggaagaagcatggcgggatatcacc
aatgcctggcaactgcgtactcgccagttagcctgtctgcaacttttagctgactggcgg
atacgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaacctg
tgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttcc
ggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcgaaagcacaggcg
ttaccggaagaggcattgccggaacccctgttgaatctgatggacatgccgggctatcgc
aaagcgtttaaggccatcaaagcgctggtggcggaggtgagcgcgtcgcatcacgtcagc
ggcgagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaatta
aaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggcggag
aagttaactcttctgttgcaggagtatccgcgttaa
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