Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_0205
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Entry
SPUL_0205 CDS
T01740
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SPUL_0205 (hrpB)
Enzymes [BR:
sel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPUL_0205 (hrpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AET52654
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Position
220275..222725
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AA seq
816 aa
AA seq
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MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKTAPQVLLSAPTGAGKSTWLPLQLLQQG
PVAGKILLLEPRRLAARNVAQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLT
RMIQRDPELRGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLDNDRLC
QRLPDAPTIVSEGRAFPVERRYQPLATLLRFDEAVAMATAELLRNENGSLLLFLPGVGEI
QRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIR
LVVDSAQERVARFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAA
AQSDPEILHSDLSGLLMEVLQWGCHDPASLFWLDRPPEVNLQAARRLLLMLSARGRKMAA
TGNDPRLAAMLVNAGEGDSAATAAMLAAILEDPPRGGGTDLSVVFSRRQPGWQQRSQQLL
KRLQVRNGEPDSALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLI
APLLLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAWRRMRIGQL
TVSVQPLAKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQFRLRLHCAAKWLPEYDWPAVD
EASLLATLENWLLPHMTGVQSLRGLKSLNVNQALRGLLDYAMLQRLDSELPGHYTVPTGS
RITIRYHEDNPPALAVRMQEMFGEAKTPTIAQGRVPLVLELLSPAQRPLQITRDLSAFWQ
GAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatgcggcgcaaagaaagttaaccccgtggagccgtttgtgacgtcattgccc
gttgccgccgtattgcctgaattgttgacagccctaaaaaccgcgccgcaggttttgttg
tccgcgcctaccggggcggggaaatccacctggctgccgttgcaactcctgcaacagggg
ccggttgctggaaaaatcctcctgcttgaaccgcgtcgtctggcggcgcgtaatgtcgcg
cagcgtctggcggaagcgttgaatgaaaagcctggcgaaacggtaggttaccggatgcgc
gcgcaaagctgcgtggggccgcgtacccggctggaagtggtgaccgaaggcgtattgacc
agaatgattcagcgcgatcccgaattacgcggcgtggggctggtgatactggatgaattt
catgagcgcagtttacaggcggatttagcgttagcgctgttgctggatatccagcaaggg
ctccgtgacgatctcaggctgttaatcatgtctgcgacgctggataacgacaggctttgt
cagcgactgcctgatgcgccgacgatcgtctcggaggggcgcgcgttcccggtggagcga
cgttatcagccgctcgcgacgcttttgcgttttgatgaagccgtcgcgatggcgacagcg
gaactgttgcgcaatgaaaacggttcgctgctgctatttttacccggcgtaggcgaaata
cagcgcgttcatgaacatctggcgtcgcgggtaggcagcgatgtcctgctttgtccgctg
tatggcgcattgtctctggaggcgcaacgcaaagcgattgttccggcacccgccgggatg
cgtaaagtggtgttggcgactaacattgccgaaaccagtttgacgattgaagggattcgt
ctggtcgtcgatagcgctcaggagcgcgtggcgcgatttgacgcgcgaacgggactgacg
cggctggttacgcagcgtatcagtcaggcatcaatgacgcagcgcgcggggcgcgccgga
cgactggcgccgggtatctgtttacatctgctggccaaagaacaggcggagcgggcggcg
gcgcaaagcgatccggaaatcttacacagcgacctttccggtttattgatggaggtgttg
cagtggggatgtcacgatccggcatcgcttttctggctggacaggccgccggaggtgaat
cttcaggccgcccgccgtttattattgatgttaagcgcgcggggccggaaaatggcggca
acaggtaacgatccgcgcctggcggcgatgttagtcaacgccggcgagggcgatagcgcc
gccactgccgccatgctcgcggccatccttgaggacccgccgcgcggcggcggtacggat
ttaagcgtagtattttcgcggcgacagccgggctggcagcagcgtagccagcagctttta
aaacggctgcaggtgcgtaatggcgagccggatagcgcgcttattatgccgctgttggcc
agagcgtttagcgaccgcatcgcgcggcgtcgtggtcaggaagggcgctatcagttagcc
aatggtatgggcgcgatgttagatgcggatgacgcgttgggacgtcatgaatggctgatc
gcgccgctgttactgcaaggtagcgcctcgccggacgcccgaatattgttggcgcagccg
ctggatatcgcctcgctgattcaggcgtgtcctgatttactgcgccagtccgacacggtt
gaatgggacgaggcgcagggaacgttgaaagcatggcgcagaatgcgtattggacagttg
acggttagcgttcagccactggcgaagccgtctgaagaggagcttcatcaggcgatgctg
aacggcatccgcgataaaggtctgtccgtccttaactggacgccggaagcggagcagttc
cgtctgcgtctgcactgtgcggcgaaatggctgccggaatatgactggcctgccgtggat
gaggcgtcgctgctggcgactctggaaaattggttgctgccgcacatgacaggcgtacag
tcgttacgagggctaaaatccctgaatgttaatcaggcgttacggggactgcttgactat
gccatgctgcaacgtctggatagtgaactgcctgggcattacactgtgccgacgggaagc
cgaataacgattcgttatcatgaagataacccgcccgcgctggcggtcagaatgcaggaa
atgtttggcgaagcgaagaccccaaccatcgctcagggccgcgtgccgctggtgctggaa
ctgctttcgccagcgcagcgaccgctacagattacgcgcgatttaagcgctttctggcag
ggggcgtatcgcgaagtgcaaaaagagatgaagggccgttaccccaaacatgtctggccg
gacgatccggcgaatacggccccaacgcggcgcacgaagaagtattcgtga
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