Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_3416
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Entry
SPUL_3416 CDS
T01740
Symbol
nfi
Name
(GenBank) putative endonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_3416 (nfi)
Enzymes [BR:
sel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
SPUL_3416 (nfi)
DNA repair and recombination proteins [BR:
sel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SPUL_3416 (nfi)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
UvrC_RNaseH_dom
Motif
Other DBs
NCBI-ProteinID:
AET55676
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All DBs
Position
complement(3425223..3425894)
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AA seq
223 aa
AA seq
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MDLASLRAQQIELASSVCREDRLDKDPPAFIGGADVGFEQGGEVTRAAMVLLKYPSLELV
EYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLLFVDGHGISHPRRLGVASHFG
LLVDVPTIGVAKKRLCGKFEPLSTEPGALSPLMDKGEQLAWVWRSKARCNPLFIATGHRV
STDSALAWVQRCMKGYRLPEPTRWADAVASGRPAFVRWQEIQR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgcgtcgctacgcgctcaacagatagaacttgcttcatcggtttgccgcgaa
gatcgcctggacaaagatccgccagcgtttatcggcggggcggacgtcggttttgagcag
gggggcgaggtgacgcgggcggcgatggtattgttgaaatatccgtcgcttgaactggta
gagtacaaggtggcacgtattgccaccaccatgccgtatatccccggctttctctctttt
cgtgaatatcctgcgctgctggcggcgtgggaacagctctcgcaaaagcccgatttgctg
tttgtggacggtcacggtatttcgcatccgcgtcggcttggcgtcgccagtcattttgga
ctgttggtggacgtgccgaccatcggcgtggcgaaaaaacggctatgcggtaaatttgaa
ccactttccaccgaacctggcgcacttagccccttaatggataaaggcgagcaactggcg
tgggtatggcgcagcaaggcgcgctgtaatccgctgtttatcgcgacagggcaccgggtc
agtactgacagcgcgctggcgtgggtacagcgctgtatgaaagggtatcgcctgccggag
ccgacgcgctgggcggatgccgtcgcttccggacgtccggcgtttgttcgttggcaagaa
attcagcgctga
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