KEGG   Selenomonas sp. oral taxon 136: AXE86_02570
Entry
AXE86_02570       CDS       T04745                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
selo  Selenomonas sp. oral taxon 136
Pathway
selo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:selo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AXE86_02570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:selo03400]
    AXE86_02570
DNA repair and recombination proteins [BR:selo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AXE86_02570
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AXE86_02570
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_19 UB2H AAA_5 AAA_22 AAA_16 Microtub_bd DUF87 Kinesin FlaG B12-binding AAA
Other DBs
NCBI-ProteinID: AME03056
UniProt: A0A109WCU3
LinkDB
Position
complement(560747..562789)
AA seq 680 aa
MAMVPKLNTTQFEGEIPFKVVAPFEPMGDQPQAIADLAGGIENGMTAQVLLGATGTGKTY
TMAKVIERVQRPTLVIAHNKTLAAQLASEFKSFFPDNYVGYFVSYYDFYQPEAYIAQTDT
YIEKDASINDEIDELRHSATCSLFERRDVIIVASVSCIYGLGSPESYHEMVLSVHKGQTI
TREEILQKLISIRYERNDIAFERGRFRVRGDVIEIFPAGYNNRGVRIEMFGDEVERIIEF
DVTTGEVYGERLHSMVFPASHYVTDDEDMKIAMADIRTELEERLAVLKGEGKLLEAQRLE
QRTNYDLEMMQEMGYCSGIENYSRHLTHRAPGATPYTLLDYFPEDFLIMIDESHVTLPQI
HAMYGGDRSRKVSLVDNGFRLPSAFDNRPLTFEEFAARINQIVYVSATPGKYEMQQAQQV
AQQIIRPTGLLDPEVEVRPLAGQIDDLMGEIRLRIGRNERVLVTTLTKRMAENLTEYLRE
AGVKVRYLHSDIATIERAEIIHDLRAGEFDVLVGINLLREGLDMPEVSLIAILDADKEGF
LRSDTALIQTIGRAARNAGGHVIMYGDVITGSMQRAIDETERRRAIQQEYNEEHGIVPKT
IVKPIVPLIEMTLVAAEDKSPYGKKDGKAKKKLGKKERENLVKSLLREMQQASRALEFER
AAELRDMIVELEGELPRKKK
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggcgatggtgccaaaactcaatacaacgcagttcgagggggagatcccgttcaaggtt
gttgcgccgtttgaaccgatgggcgatcagccgcaggcgattgccgatcttgccggcggc
atcgagaacggcatgacggcacaggtgctgctcggagccacgggcacgggcaagacctac
acgatggcaaaggtcatcgagcgcgttcagcgtccgaccctcgtcatcgcacacaacaag
actcttgccgcgcagctcgcgagtgagttcaagtcattttttcccgacaactacgtcggt
tactttgtcagctactacgacttctaccagcccgaggcgtacatcgcccagacggatacc
tatattgaaaaggatgcgtcgatcaacgatgagatcgatgagttgcgccactccgcgacc
tgttcactctttgagcggcgcgacgtcatcatcgtggcgagcgtctcgtgcatttacgga
ctcggctcgccggagagctatcacgagatggttctctccgtgcacaaggggcagacaatc
acgcgcgaggagatcctgcagaagctcatctccatccgttacgagcgcaacgatatcgcg
tttgagcgcggacgtttccgtgtgcgcggcgacgtgattgagatctttcccgcagggtac
aacaaccgcggcgtgcgcattgagatgttcggcgacgaggtggagcgcatcatcgagttc
gacgtgacgacgggcgaggtttacggcgagcggcttcactccatggtgtttccggcgtcc
cactacgtcacggacgatgaggatatgaagatcgccatggctgacattcgcacggagctt
gaggagcggctcgccgtactgaaaggtgagggcaaactccttgaggcacagcggctggag
cagcgcacgaactatgacctcgaaatgatgcaggagatgggctactgctccggcatcgag
aactactcgcgtcacctcacgcaccgcgcgccgggcgcgactccgtacaccctcctcgac
tacttccccgaggacttcctcatcatgatcgacgagtcgcatgtgaccctgccgcagatt
cacgccatgtacggcggcgaccgcagccgcaaggtctcactcgtggacaacggctttcgc
ctgccgtccgcgttcgacaaccgcccactgacgttcgaggagttcgcggcgcgcatcaat
cagatcgtctacgtctccgcaacgcccggaaaatacgagatgcagcaggcacagcaggtc
gctcagcagatcatccgcccgacggggctcctcgatcccgaggtcgaggtgcgtccgctc
gcagggcagatcgacgacctcatgggtgagatccgcctgcgcatcgggcgtaatgaacgc
gtcctcgtcacgacgctcaccaagcgcatggcagagaacctcactgagtatctgcgtgag
gcgggcgttaaggtgcgctacctccactcggacatcgcaaccatcgagcgcgcggagatc
attcacgatctgcgcgcgggcgagttcgacgtgctcgtcggcatcaatctcctgcgcgag
gggctcgatatgccggaggtctcgctcatcgccatcctcgacgcggacaaggagggcttt
ctgcgctccgacaccgcgctcatccagaccatcggacgtgccgcccgcaacgccggcggg
cacgtcatcatgtacggcgatgtcatcacgggctcgatgcagcgcgccatcgacgagacg
gagcgccgccgtgcgatacagcaggagtacaacgaggagcacggcatcgtgccaaagacc
atcgtcaagcccatcgtcccgctcatcgagatgacgcttgtcgcggctgaggataagagc
ccgtacgggaagaaggacggcaaggcaaagaaaaaactcggcaagaaggagcgcgagaac
ctcgtcaagagtcttctgcgcgagatgcagcaggcgtcgcgtgcgctggagttcgagcgt
gcggcagagctgcgcgacatgatcgtcgaactcgagggcgaactgccgaggaagaaaaaa
taa

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