Selenomonas sp. oral taxon 136: AXE86_02570
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Entry
AXE86_02570 CDS
T04745
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
selo
Selenomonas sp. oral taxon 136
Pathway
selo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXE86_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selo03400
]
AXE86_02570
DNA repair and recombination proteins [BR:
selo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXE86_02570
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXE86_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
UB2H
AAA_5
AAA_22
AAA_16
Microtub_bd
DUF87
Kinesin
FlaG
B12-binding
AAA
Motif
Other DBs
NCBI-ProteinID:
AME03056
UniProt:
A0A109WCU3
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All DBs
Position
complement(560747..562789)
Genome browser
AA seq
680 aa
AA seq
DB search
MAMVPKLNTTQFEGEIPFKVVAPFEPMGDQPQAIADLAGGIENGMTAQVLLGATGTGKTY
TMAKVIERVQRPTLVIAHNKTLAAQLASEFKSFFPDNYVGYFVSYYDFYQPEAYIAQTDT
YIEKDASINDEIDELRHSATCSLFERRDVIIVASVSCIYGLGSPESYHEMVLSVHKGQTI
TREEILQKLISIRYERNDIAFERGRFRVRGDVIEIFPAGYNNRGVRIEMFGDEVERIIEF
DVTTGEVYGERLHSMVFPASHYVTDDEDMKIAMADIRTELEERLAVLKGEGKLLEAQRLE
QRTNYDLEMMQEMGYCSGIENYSRHLTHRAPGATPYTLLDYFPEDFLIMIDESHVTLPQI
HAMYGGDRSRKVSLVDNGFRLPSAFDNRPLTFEEFAARINQIVYVSATPGKYEMQQAQQV
AQQIIRPTGLLDPEVEVRPLAGQIDDLMGEIRLRIGRNERVLVTTLTKRMAENLTEYLRE
AGVKVRYLHSDIATIERAEIIHDLRAGEFDVLVGINLLREGLDMPEVSLIAILDADKEGF
LRSDTALIQTIGRAARNAGGHVIMYGDVITGSMQRAIDETERRRAIQQEYNEEHGIVPKT
IVKPIVPLIEMTLVAAEDKSPYGKKDGKAKKKLGKKERENLVKSLLREMQQASRALEFER
AAELRDMIVELEGELPRKKK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtgccaaaactcaatacaacgcagttcgagggggagatcccgttcaaggtt
gttgcgccgtttgaaccgatgggcgatcagccgcaggcgattgccgatcttgccggcggc
atcgagaacggcatgacggcacaggtgctgctcggagccacgggcacgggcaagacctac
acgatggcaaaggtcatcgagcgcgttcagcgtccgaccctcgtcatcgcacacaacaag
actcttgccgcgcagctcgcgagtgagttcaagtcattttttcccgacaactacgtcggt
tactttgtcagctactacgacttctaccagcccgaggcgtacatcgcccagacggatacc
tatattgaaaaggatgcgtcgatcaacgatgagatcgatgagttgcgccactccgcgacc
tgttcactctttgagcggcgcgacgtcatcatcgtggcgagcgtctcgtgcatttacgga
ctcggctcgccggagagctatcacgagatggttctctccgtgcacaaggggcagacaatc
acgcgcgaggagatcctgcagaagctcatctccatccgttacgagcgcaacgatatcgcg
tttgagcgcggacgtttccgtgtgcgcggcgacgtgattgagatctttcccgcagggtac
aacaaccgcggcgtgcgcattgagatgttcggcgacgaggtggagcgcatcatcgagttc
gacgtgacgacgggcgaggtttacggcgagcggcttcactccatggtgtttccggcgtcc
cactacgtcacggacgatgaggatatgaagatcgccatggctgacattcgcacggagctt
gaggagcggctcgccgtactgaaaggtgagggcaaactccttgaggcacagcggctggag
cagcgcacgaactatgacctcgaaatgatgcaggagatgggctactgctccggcatcgag
aactactcgcgtcacctcacgcaccgcgcgccgggcgcgactccgtacaccctcctcgac
tacttccccgaggacttcctcatcatgatcgacgagtcgcatgtgaccctgccgcagatt
cacgccatgtacggcggcgaccgcagccgcaaggtctcactcgtggacaacggctttcgc
ctgccgtccgcgttcgacaaccgcccactgacgttcgaggagttcgcggcgcgcatcaat
cagatcgtctacgtctccgcaacgcccggaaaatacgagatgcagcaggcacagcaggtc
gctcagcagatcatccgcccgacggggctcctcgatcccgaggtcgaggtgcgtccgctc
gcagggcagatcgacgacctcatgggtgagatccgcctgcgcatcgggcgtaatgaacgc
gtcctcgtcacgacgctcaccaagcgcatggcagagaacctcactgagtatctgcgtgag
gcgggcgttaaggtgcgctacctccactcggacatcgcaaccatcgagcgcgcggagatc
attcacgatctgcgcgcgggcgagttcgacgtgctcgtcggcatcaatctcctgcgcgag
gggctcgatatgccggaggtctcgctcatcgccatcctcgacgcggacaaggagggcttt
ctgcgctccgacaccgcgctcatccagaccatcggacgtgccgcccgcaacgccggcggg
cacgtcatcatgtacggcgatgtcatcacgggctcgatgcagcgcgccatcgacgagacg
gagcgccgccgtgcgatacagcaggagtacaacgaggagcacggcatcgtgccaaagacc
atcgtcaagcccatcgtcccgctcatcgagatgacgcttgtcgcggctgaggataagagc
ccgtacgggaagaaggacggcaaggcaaagaaaaaactcggcaagaaggagcgcgagaac
ctcgtcaagagtcttctgcgcgagatgcagcaggcgtcgcgtgcgctggagttcgagcgt
gcggcagagctgcgcgacatgatcgtcgaactcgagggcgaactgccgaggaagaaaaaa
taa
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