Selenomonas sp. oral taxon 136: AXE86_03180
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Entry
AXE86_03180 CDS
T04745
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
selo
Selenomonas sp. oral taxon 136
Pathway
selo03030
DNA replication
selo03430
Mismatch repair
selo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXE86_03180
03430 Mismatch repair
AXE86_03180
03440 Homologous recombination
AXE86_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
selo03032
]
AXE86_03180
03400 DNA repair and recombination proteins [BR:
selo03400
]
AXE86_03180
Enzymes [BR:
selo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXE86_03180
DNA replication proteins [BR:
selo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXE86_03180
DNA repair and recombination proteins [BR:
selo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXE86_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
HHH_3
T2SSK
HHH_5
DUF655
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AME03172
UniProt:
A0A109WCW1
LinkDB
All DBs
Position
complement(698615..702379)
Genome browser
AA seq
1254 aa
AA seq
DB search
MKTYRILSCAADLLLRLLHGLALTEEERALLRACVVRHVEVCGDTWEIVVGTQTVMDDAL
IERIAAQVAANYQLSQVLIQQNLVALAPAVAPLWEQIVRDAAAGDAVLYHTLLQADYAVD
GNVIRISAPGAFGAELFAQSSTAGRIEHAVRTHVGCACRVVCEESALSGALPSADWTPPA
VPAAAPTKATPSAALARAAKNTKAKELPANVIMGRGVSGEARTLGVIEDEVKNVVLEGEV
FDPQANQLKSGAYILTIKFADATNGISCKKFFSARGKTTQEEIDAEVERIIKAIGKGGAV
RIQGKIEYDKFISDYVLFIDSMERRSVPQREDTAEEKRVELHAHTKMSALDAVVPPKVLV
ETAARWGWPAVAITDHGVVQAFPEAMNTARALAKKGIDIKIIYGMEGYLVDGEDDARAFH
IIFLAKNKTGLYNLYKLVSLSHIRYFRGTKKRGRPRVPRAVLEQYREGIIVGSACEAGEL
IRGIVAGRPDAELEEMAKFYDFLEIQPIHNNDFLKFDDRFPMQTDEDLRDINRKVDELAR
KLGKPLIATCDVHFLNPEDAVYRAMIQKANGYRDAERQPPLYLRTTEEMLAEFDYLGAER
AYECVVTNPRRIAEETERFLPIPDELYAPMVPGADREIQEMSYARARKLYGENLPKIVSD
RLELELKPILRHGFAALYIIAQRLVKKSNDDGYLVGSRGSVGSSFVATMIGVTEVNPLPP
HYRCPHCQYNRFIDDGSVGSGFDLPSEDCPVCGTPLIKDGHNIPFAVFLGFDGDKVPDID
LNFSGDYQPVAHKYTEVLFGKMNVFRAGTIAGLQDKNAYGYAMHYYEDQGEAKGRPYIEH
MMRGCMGVKATTGQHAGGIMVVPRDMDVHYFTPIQRPANNMESDTLTTHFDYHSISERLV
KLDILGHDDPTVIKMLEELTHRDPETIPFDDPATMSIFTSTDALGITPEDLGANMGTYGI
PEFRTSFTQKMIDDSNPDCFADLVRISGFSHGTNVWLGNAQDLIKAGTSTLKDAISARDD
IMNYLMQNGIEPLLSFKTMENVRKGRGIAPDVVEKLRAGGIPEWYIESCQKIKYLFPRAH
ATAYVMMGYRIAFCKVHYPLAYYAAYFSIRAAEFDANIISKGKDAVRAAIDALLAEAREH
RGKLDNKKQDTLIVLQLAWEMYLRGFSCEPVDLYASDAEKFILHENSLLPPFTAIPGMGQ
KAAQAIVEARRDGRFISVEDLATRAHVPAPAIEVLRTHGCLDGMMESNQVELFA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctatcgaatcctttcatgtgcggcagatctgctgctgcgcctgctgcatggg
ctcgccctcaccgaggaggagcgggctcttttgcgtgcctgcgtcgtccgtcatgtcgag
gtatgcggcgatacgtgggagattgtcgtcggaacgcagacggtcatggatgatgctctc
atcgagcgcatcgcggcgcaggtggcggcgaactatcagctctcgcaggtgctcatccag
cagaatctcgtcgcgcttgccccggcggtcgcgccgctctgggagcagatcgtccgcgat
gctgccgcgggcgatgccgtcctctatcatacgctgctgcaggcggactacgctgtggac
ggcaacgtcatccgtatctctgcgcccggtgcattcggcgcagagctctttgcgcagagc
agtacggcaggacgtatcgagcatgccgtgcgcacgcatgtcggctgcgcctgccgcgtc
gtctgcgaggagtctgcgctcagtggtgcactccccagcgcagactggacaccgcccgcc
gtgcctgccgctgcaccaaccaaggcgacaccatccgccgcactggcgcgcgcggcgaag
aacaccaaggcgaaggagctccccgccaatgtcattatggggcgcggcgtctcgggcgag
gcacgcacgttgggcgtgatcgaggacgaggtcaagaacgtcgtcctcgagggcgaggtc
tttgacccgcaggcgaaccagctgaagtccggtgcctatatcctcaccatcaaatttgcc
gatgcgacgaacggaatcagctgcaagaagtttttctccgcgcgcggcaagacgacgcag
gaggagattgacgccgaggtcgaacgcatcatcaaggcgattggcaagggcggtgcggtg
cgcatccaagggaaaatcgaatacgataaattcatcagcgactatgtgctcttcatcgac
agcatggagcggcgcagcgtcccgcagcgcgaggatacagcggaggaaaaacgcgttgag
ctgcacgcgcatacgaagatgagcgcgctcgatgccgtcgtcccgcccaaggtgctcgtc
gagacggcggcgcgttggggctggccggcggtcgccatcaccgaccacggcgtcgtgcag
gcattccccgaggcgatgaatacggcgcgcgccctcgcgaagaagggcatcgacatcaag
atcatctatggcatggagggctatctcgtcgacggcgaggacgacgcccgtgcctttcac
atcatctttttggcgaaaaataagacggggctctataacctctataagctcgtctcgctc
tcgcatattcgctacttccgcgggacaaagaagcgcggtcggccgcgtgtgccgcgtgcc
gtcctagagcagtaccgcgaggggatcatcgtcggctctgcctgcgaggcgggcgagctg
atccgcggcatcgtcgccgggcgtcccgatgcggagctggaggagatggcgaagttctac
gacttcctcgagatccagcccattcacaacaatgactttttgaaatttgacgaccgcttt
cccatgcagacggacgaggatctcagggacatcaaccgcaaggtggacgagctggcacgc
aaactcggcaagccgctgatcgcgacctgcgatgtgcatttcctcaatcccgaggatgcc
gtctaccgcgccatgatccaaaaggcgaatggctaccgtgacgccgagcgtcagccgccg
ctctatctgcgcacgacggaggagatgctcgcggagttcgactatctcggtgcggagcgc
gcctacgagtgcgtcgtaacgaatccgcgccgcatcgcggaggagacggagcgctttctc
ccaatccccgatgagctctatgcgccgatggtaccgggcgcagatcgcgagattcaggag
atgtcctacgcacgcgcgcgaaaactctacggcgagaatctgccgaagattgtctccgac
cgtctcgagctcgagctgaagccgatcctgcggcatggatttgccgcgctctacatcatc
gcccagcgcctcgtgaaaaaatccaacgatgacggctatctcgtcggctcgcgcggatcg
gtcggctcctcctttgtcgcgacgatgatcggcgtcaccgaggtcaacccgctgccgccg
cactatcgctgcccgcactgtcagtacaatcggttcatcgacgatggctcggttgggagc
ggatttgatctgccgtccgaggactgtcccgtctgcggcacgccgctcatcaaggacgga
cataacatcccgttcgctgtattcctcggttttgacggggacaaggtgcccgatatcgat
ctgaacttttcgggcgactatcagcccgtcgcacacaagtacacggaagtcctcttcggc
aagatgaatgtgttccgtgcgggcacgatcgcaggcctgcaggacaagaatgcctacggc
tacgccatgcactactacgaggatcagggcgaggcgaagggccgcccctacatcgagcac
atgatgcgtggctgcatgggggtcaaagcgacgacgggacagcacgcgggcggcatcatg
gtcgtgccgcgcgacatggacgtgcactacttcacgcctatccagcgccctgcgaacaat
atggagtcggatacgctcacaacccatttcgattaccattccatcagtgagcgcctcgtc
aagctcgatattctcggacacgatgatccgacggtcatcaagatgctggaggagctgacg
caccgcgaccccgagaccatcccgtttgacgatcccgcgaccatgtccatcttcacctcg
accgacgcgctcggcatcacgcctgaagatctcggggcgaatatggggacgtacggcatc
ccggagttccgcacgtcatttacgcagaagatgatcgacgactcgaacccagactgtttt
gccgatctcgtgcggatctcgggcttttcccacgggacgaacgtctggctcggcaacgca
caggatctcatcaaggcgggcacgagtacgctgaaggacgcgatctccgcgcgtgacgac
atcatgaactacctcatgcagaacggcatcgagccgctgctctcgttcaagaccatggag
aatgtgcgaaagggcagaggtatcgcgcccgatgtcgtggagaaactgcgcgcgggcggg
atccccgagtggtatatcgagtcctgccagaagatcaaatacctctttccgcgcgcccat
gcgaccgcgtatgtcatgatgggctaccgtattgcgttctgcaaggtgcactatccactc
gcatactacgccgcctacttctccatccgcgccgcagagttcgatgcaaacatcatctcg
aagggcaaggatgccgtgcgtgcggcaatcgacgcgctcctcgctgaggcgcgtgagcac
cgcggcaagctggacaacaagaagcaggacacgctcattgtcctgcagctcgcatgggag
atgtacctgcgcggcttctcctgtgagcccgtcgatctctacgcctccgatgcggagaaa
ttcatcctgcatgaaaactcccttttgccgccctttacggcgatcccgggcatgggacag
aaggcggcgcaggcgattgtcgaggcgcggcgggatggacgcttcatctccgtcgaggat
ctcgcgacgcgcgcccatgtgcccgcgcctgccatcgaggtgctgcgtacacacggctgc
ctcgacggcatgatggagagcaatcaggttgagctgtttgcgtaa
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