Salmonella enterica subsp. enterica serovar Tennessee: SEET0819_23370
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Entry
SEET0819_23370 CDS
T03730
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
senc
Salmonella enterica subsp. enterica serovar Tennessee
Pathway
senc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
senc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEET0819_23370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senc03019
]
SEET0819_23370
03009 Ribosome biogenesis [BR:
senc03009
]
SEET0819_23370
Messenger RNA biogenesis [BR:
senc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SEET0819_23370
Ribosome biogenesis [BR:
senc03009
]
Prokaryotic type
rRNA helicases
SEET0819_23370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AHN82032
LinkDB
All DBs
Position
complement(4861854..4863743)
Genome browser
AA seq
629 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
LETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREERPRRER
RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE
VLQHFTRTRILNKPMNMQLLGDAVPHAGGERRGGGRSFSGERREGGRNFSGERREGGRGD
GRRFSGERRESRGPRRDDSTGRRRFGGDA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctggggctgaaggctcctatccttgaagcc
cttaccgatctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcatctg
ctgggcggtcgcgacgtgctgggcatggcccagaccggtagcggcaaaaccgcagcgttc
tctttaccgctgctcaacaatcttgatcctgagctgaaggcacctcagattctggtgctg
gcgccaacccgcgaactggcggtacaggttgccgaagccatgacggatttctctaaacac
atgcgcggcgtaaacgtggttgccctgtacggcggtcagcgttatgacgtgcagttacgc
gccctgcgtcaggggccgcagatcgttgtcggtacgccgggacgtctgcttgatcactta
aaacgcggcaccctcgacctctctaaactgagtggtctggtgctggatgaagccgacgaa
atgctgcgtatgggcttcatcgaagacgttgaaactattatggcgcagatcccggaaggt
catcagaccgctctgttctccgccactatgccggaagcgattcgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactacccgtcctgacatc
agccagagctactggactgtctggggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgtacgtaccaaaaacgcgaccctggaa
gtagcagaagcgctggaacgtagcggctacaacagcgccgcgttgaatggcgatatgaac
caggcgctgcgtgagcagactctggaacgcctgaaagatggtcgtctggacatcctgatc
gctaccgacgttgcggcacgtggtctggacgttgaacgtatcagcctggtggtgaactac
gatattccgatggactccgagtcctacgttcaccgtatcggtcgtaccggccgtgcgggt
cgcgccggtcgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcaccatgaagctgaccattccggaagtggaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagttcaacagcaactggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgtctgctgaaggtgaagagctggat
ctcgaaacgctggccgccgcactgctgaaaatggcgcagggcgagcgtccgctgattctg
ccgccggatgcgccgatgcgtcccaagcgtgaattccgtgaccgtgacgaccgtggtccg
cgcgatcgtaatgaccgtggcccgcgtggcgaccgtgaagaacgtccgcgtcgtgaacgt
cgtgacgttggcgatatgcagttataccgcattgaagtgggccgtgatgacggcgttgaa
gttcgtcatatcgtgggcgctatcgctaacgaaggcgatatcagcagccgttacattggt
aacattaagctgttcgcgtctcactccaccatcgagctgccgaaaggtatgccgggcgaa
gtgctccagcacttcacgcgtacccgcattctgaacaagccgatgaatatgcagctgttg
ggtgatgctgttccgcacgcgggcggcgaacgtcgcggcggtggtcgtagcttcagtggc
gaacgtcgtgaaggcggtcgtaatttcagcggagaacgtcgtgaaggtggtcgtggcgat
ggtcgtcgcttcagcggcgaacgtcgtgaaagccgtggtccgcgtcgtgatgactctacc
ggtcgccgtcgtttcggcggtgatgcgtaa
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