Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_07745
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Entry
CFSAN001992_07745 CDS
T02479
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFSAN001992_07745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senj03400
]
CFSAN001992_07745
Enzymes [BR:
senj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFSAN001992_07745
DNA repair and recombination proteins [BR:
senj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFSAN001992_07745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF4351
Motif
Other DBs
NCBI-ProteinID:
AGF81865
LinkDB
All DBs
Position
complement(1516951..1517742)
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AA seq
263 aa
AA seq
DB search
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQLVTRIETRGKALLTHFS
NGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKTILLYSASDIEMLTAEQITTH
PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFLAGLGNYLRVEILWQVG
LTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADENKHHGALFRFKVFHRDGEACER
CGGIIEKTTLSSRPFYWCPHCQK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccggaaattcgtcgtgcggcggataatctggaggcggcaatcaaaggc
aaacccttaaccgatgtctggttcgcctttgcacagttaaaaccgtatgaatcgcagctt
accggtcaacttgttacccggatagagacgcggggaaaagcgttattgacacacttttca
aatggcctgacgctctacagccacaaccaactctatggcgtatggcgggtgatcgacacc
ggtgaaataccgcagaccacgcgtatattgcgcgtcaggctacaaacggcagataaaact
attctgctttatagcgcgtctgatatcgaaatgctgacagcagagcagatcacgacgcac
ccctttttacagcgagtcggtccggatgtgctggacgcgcgtctcactccggaagaggtt
aaagctcgattgctgtcgccgcgttttcgcaaccgacaattttccggactgttgctggat
caggcctttctggcgggattggggaattatctgcgcgttgaaatcctctggcaggtaggg
ttaaccggacagcataaagcgaaagatctcaacgaggcgcaactgaatgcgctttctcac
gcgctgttggatattccgcgcctgtcctacacgactcgcggtcaggcggatgagaacaag
catcatggcgcactgtttcgctttaaggtttttcaccgtgacggcgaagcgtgcgagcgg
tgtggcggcattattgaaaagacaacactgtcctcacgcccgttttactggtgcccgcat
tgccagaaatag
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