Staphylococcus epidermidis ATCC 12228: SE_0888
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Entry
SE_0888 CDS
T00110
Name
(GenBank) PriA, primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SE_0888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_0888
Enzymes [BR:
sep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SE_0888
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SE_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
ResIII
DEAD
Helicase_C
PriA_CRR
PIF1
T2SSE
SWI2_SNF2
Helicase_C_2
AAA_19
AAA_30
SMC_N
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AAO04485
UniProt:
A0A0H2VG29
LinkDB
All DBs
Position
883754..886162
Genome browser
AA seq
802 aa
AA seq
DB search
MIAKVIVDIPSKSVDFKFDYIVPKNLERVIQIGVRVVVPFGPRTIQGYVMNIQQKPDGNM
DISKLKEIKEVRDIKPELTSELIQLSEWMSHYHVMKRISVLEAMLPSAIKAKYKKAFSII
DPKNLSSKTKALFNNDGYYLYKEAQQNNDLEEMLTLLNQGLIEEVTILSQNTKKKTQKAV
GVVNTLNGDEVLAKLEKYTKQYDLYAFLLEESHRTVFLKEINDMGFSHSSLDSLIKKGYI
EKYIAEVFRDPYANRIFEQEQKRILTKEQQDAFEAIQHYIHDEKERTFLLHGVTGSGKTE
VYLQTIEEVLNKGKEAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSKGERYDEWQKI
RDGRARVSVGARSSIFAPFKNLGIIIIDEEHESTYKQEDYPRYHARDIAQWRSQFHHCPV
VLGSATPSLESYARAEKNVYELLSLPHRVNQQALPHIDIIDMREELSEGNRSMFSIALRQ
AIQERLDKKEQIVLFLNRRGYASFMLCRDCGYVPQCPHCDISLTYHKTTDQLKCHYCGYQ
ENPPSQCPNCEGDHIRQVGTGTQRVEELLQQEFPHARIIRMDVDTTSRKGAHEKLLNDFE
AGKGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVSGRAGRHE
KEGQVIIQTYNPDHYSIKDVKLNDYLSFYQKEMNYRKLGKYPPYYFLINFTISHTDIKKV
MMASKHIHQILVQHLSEKAFVLGPSPAALARINNEYRFQILVKYKSEPQLHQALQYLDDY
YHDQYVKDKLSLKIDINPQMMM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaaagtaattgttgatattccgtcgaaaagtgtcgattttaaatttgattat
atcgttcctaaaaatttagaacgtgtgattcaaattggcgttcgcgttgtggtacctttt
ggccctagaactatacaaggatacgtcatgaatattcaacaaaaaccagatggaaatatg
gatatatcgaaactaaaagaaataaaagaagtacgtgatattaaacctgaattaacatcc
gaactgattcaattaagcgaatggatgagccattatcatgtgatgaaacgtatttctgtt
ttagaagcgatgttgccaagtgccattaaagcaaagtataagaaagctttttcaattatc
gatccaaaaaatttatcttcaaaaaccaaagcgctatttaacaatgacggttattactta
tataaagaagctcagcaaaacaatgatttagaagaaatgttgactttgttaaatcaagga
ttgattgaagaggtcacgatactttctcaaaacacaaaaaagaaaactcaaaaagctgtt
ggcgtagttaatacgttgaatggtgatgaagtacttgcaaaactcgagaaatatacaaaa
caatatgatttgtatgcatttttattagaagagtctcatcgaacagtgtttttaaaagaa
atcaatgatatgggcttctctcactcgagtttagattctttaatcaaaaaaggttatatt
gaaaaatatatcgccgaggttttcagagatccatatgcaaatcgtatatttgaacaagaa
caaaagaggatattaactaaagaacagcaagatgcatttgaagctattcaacattatatt
catgatgaaaaagaaagaacatttttattacacggagtcacaggttcaggtaaaaccgaa
gtctatcttcaaacaatagaagaagttcttaataaaggtaaagaagccatgatgttagtg
ccggaaatcgccttaacacctcagatggtactaagatttaaacgtcgatttggagatgat
gtagcggtattacattccggactttcaaaaggtgaacgttatgatgagtggcaaaaaatt
agagacggtcgagctcgagtgagtgtaggtgctcgttcaagtattttcgcaccgtttaaa
aatttaggcatcattataattgatgaagaacatgaatctacatataaacaagaagattat
cccagatatcatgcacgtgatattgcacaatggagaagtcaatttcatcattgtcctgta
gttttaggtagcgcaacaccgagtcttgagtcatatgctagagcagaaaaaaatgtttac
gagttgttgtcattgccacatagagtcaatcaacaagcgttaccgcatattgatattata
gatatgagagaagaattaagtgaaggtaatcgttccatgttttctatagcactaagacaa
gcgatacaagaacggttggataaaaaagaacaaatagtactattcttaaatagaagggga
tatgcttcatttatgttatgtagagattgtggttacgttccccaatgtccccattgtgat
atttcgttaacatatcataaaacaaccgatcaattaaaatgtcattactgtggttatcaa
gaaaatccaccatctcaatgtccaaattgtgaaggtgatcatatcagacaagtcggaact
ggaacgcaacgtgtagaagaattattacaacaagaattccctcatgctcgtattataagg
atggatgttgatacaacttcaagaaaaggtgcacatgagaaattgttaaatgactttgaa
gcaggaaaaggagatatcttattaggtacgcaaatgattgctaaaggtttggattatcct
aacattactctagttggtgtgctcaatgctgacactatgttaaacttacctgactttcgt
gccagtgaacgaacataccaacttttaactcaggtatctggacgcgcaggtcgtcatgaa
aaagaaggacaagttatcatacaaacgtacaaccctgatcattattcaataaaggatgtg
aaattaaacgattatctttctttttatcaaaaagaaatgaattatcgaaaattaggaaaa
tatccaccttactattttttgattaactttaccatttcacatactgatataaaaaaggtc
atgatggcctctaagcatatacatcaaattttagtacagcacttaagtgaaaaagcattc
gtgctaggcccttcaccagcagcactagcaagaattaacaatgagtatcgttttcaaata
ctagtaaaatataagagtgagcctcaattacatcaagcgttacaatatttagatgattat
tatcatgatcaatatgtaaaggataaactatcattaaaaattgatatcaatccacaaatg
atgatgtga
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