Staphylococcus equorum: SE1039_08480
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Entry
SE1039_08480 CDS
T04160
Name
(GenBank) beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
seqo
Staphylococcus equorum
Pathway
seqo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seqo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SE1039_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seqo03019
]
SE1039_08480
Messenger RNA biogenesis [BR:
seqo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SE1039_08480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ALM56631
LinkDB
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Position
complement(891418..893280)
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AA seq
620 aa
AA seq
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MKQIHKNEVAVYALGGLGEIGKNTYAVEYQDEIVIIDAGIKFPDDNLLGIDYVIPDITYL
EQNQDKIVGLFITHGHEDHIGGVPYLLKQINVPIYGGPLALGLIRNKLEEHHLLRTAKLI
EIDESSVIKSKHFEVSFYLTTHSIPEAYGVIVNTPEGNIVHTGDFKFDFTPVGEPANIAK
MAKLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVEKIFHDCNGRIIFATFASNIYRVQQ
AVEAAIKHNRKIVTFGRSMENNIKIGMELGYIKAPPETFVEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYRAGAEVIHNKV
SNIHTSGHGSKGDQQLMLRLLRPKFFLPIHGEYRMLKAHGQSGVECGVEPDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFKTNKL
LSGPDIISRGFVYMRESGQLIYDAQRRIKTDVISKLNQNPEIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEDNNQSFAKKPSPKNDKPKNNNTKAPAKNPKPNNQNKKKNNNN
NNPKPKPKPKKDETNQSSES
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattcataaaaatgaagttgcggtttatgctcttggtggcttaggcgaaatt
ggtaaaaatacttatgccgttgagtatcaggacgaaatcgttattatcgatgcaggtatc
aaattccctgatgataatttattaggtattgactatgtcattcctgatattacttattta
gagcagaaccaagataaaattgttggtctgtttatcactcacggacatgaggaccatata
ggtggtgtgccctacctattaaagcaaattaatgtgcctatatatggtggaccattagct
ttaggtttaatcagaaataaattagaagaacatcatttattaagaactgcaaaacttatt
gaaattgatgaaagtagtgtcatcaaatctaaacattttgaagtttcattctatttaact
acacacagtattccagaagcatatggtgttatcgttaatacgccagaaggaaatattgtt
catacgggtgacttcaaatttgatttcacaccagttggtgaaccagcaaatatagctaaa
atggcaaaattaggtgaagaaggtgtactttgtttgctttctgactctaccaattcactt
gtaccagattttactttaagtgaacgtgaagtcggccaaaatgttgaaaagatattccat
gattgtaatggacgaatcatattcgccacatttgcatcaaacatctatcgtgttcaacaa
gcagttgaagctgcaattaaacacaaccgtaaaattgttacatttggtcgttcaatggaa
aacaacattaagattggtatggaattaggctatatcaaagcaccaccagaaacgtttgtt
gaaccaaataaaatcaataccgtgcctaagcatgaattattgattctatgtacaggttct
caaggtgaaccaatggcagcattatctagaattgccaacggtacgcataaacaaattaaa
atcatccctgaagatacagttgtatttagttcttcacctattccaggtaatacgaaaagt
attaatcgcacaataaattcactttatcgtgccggtgcagaagttattcataataaagta
tctaatattcatacttctggtcacggttctaaaggcgatcaacagttaatgttacgtctg
ttacgtcctaagttctttttaccaatccatggtgaataccgtatgctaaaagcgcatggt
caatcaggtgttgagtgtggcgttgaaccagataatgtatttatttttgatataggtgat
gtcttagcactgacacatgattctgctagaaaagctggtagaataccatcaggtaatgta
ttagttgatggtagtggtattggtgatatcggtaatgtagttattcgtgatcgtaaacta
ttatcagaagaaggtttagtgattgttgttgtaagtatagacttcaaaacaaacaaacta
ctttctggacctgatattatctcacgtggttttgtatacatgcgtgaatctggacaattg
atttatgatgcacaacgtagaatcaaaacggatgttatttcaaaattaaatcaaaaccca
gagattcaatggcatcaaattaaatcgtcaatcattgaaacgttacagccttatctattt
gaaaagactgcacgtaaaccaatgatcttaccagtcattatgaaagtaaatgaagataac
aaccaatcatttgctaagaaacctagccctaaaaatgacaaacctaaaaacaacaacacg
aaagcaccagcaaaaaatccaaaacctaacaatcaaaacaagaaaaaaaacaataacaat
aacaatccaaaacctaaacctaaacctaaaaaagatgaaacaaatcaatcatctgaatca
tag
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