Prodigiosinella confusarubida ATCC 39006: Ser39006_000155
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Entry
Ser39006_000155 CDS
T05290
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_000155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_000155
Transporters [BR:
sera02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Ser39006_000155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AUH02685
UniProt:
A0A2I5T1C8
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All DBs
Position
complement(35622..36722)
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AA seq
366 aa
AA seq
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MIIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMA
QLILPLSLFLGLLMAYGRLYSESEITVMHACGMGKNVLLKAALLLSIFTVVLATVNVLWL
SPWSSRHQDEVLAEAKANPGMATLAEGQFQSTQDGNSVLFVSNVNGQEFEHVFLAQLHPR
DNSRPSVVVADRGHVSQNSDGSQIVTLNKGTRYEGTAMLRDFRITDFKDYKAVVGHQAVA
VDPSNVEQMSMKTLWHSKDINARAEFHWRLTLIVSVLVMAIMVVPLSVVNPRQGRVLSML
PAMLLYLIFFLLQSSLRSNAGKGKLDPMIWMWFTNLVYFAIAVGLNLWDSVPARKVRARL
NLRGAA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcattcgatatctggtacgggaaactttcaagagccaagtagccattcttttt
attctgctgctgatttttttctgtcaaaaattagtacgaatattaggcgctgcggttgat
ggcgatattccgacaaatttggttttatccctgttggggctgggtatcccggagatggcg
cagcttattctgccgttgagcctgttcctcggattattgatggcctatggccgtttatac
tctgaaagtgaaatcacagtcatgcatgcctgcgggatggggaagaatgtcctgctgaag
gcggcgttattgttgtctatattcactgtcgtactggcgacggtgaatgtcttatggctg
agcccctggtcctcgcgtcatcaggatgaagtgttggcggaggcgaaagccaaccccgga
atggcaacgttggcggaagggcagtttcaatcgactcaggatggcaactctgtgctgttt
gtcagcaatgtcaacggccaggagttcgaacatgtatttttggcacagttgcacccccgc
gataatagccgtccatctgtggtggtggcagaccgtggtcatgtttcacagaatagtgat
ggttcccagattgtcacgctgaataagggtacccgctatgaaggtacggctatgctgcgc
gattttcgcatcacggattttaaagactataaggctgtcgtgggtcatcaggcagtggca
gttgatcccagtaatgtagaacagatgagcatgaaaacgctgtggcactccaaagatatt
aatgccagagctgagtttcattggcgtttgacgctgatcgtttctgttttagtgatggct
ataatggtggtgccactcagtgtggttaacccgcgtcaggggcgtgtgttgagtatgctc
ccggcaatgttgctctacctgattttctttttgttacagagctcgttacgttccaatgct
ggcaaaggtaagctcgacccgatgatatggatgtggtttaccaacctggtctatttcgct
attgcagtgggactcaacctgtgggatagcgttcctgcgcgtaaagtacgggcccgtctg
aatctgagaggggcggcctga
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