KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_006140
Entry
Ser39006_006140   CDS       T05290                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera00300  Lysine biosynthesis
sera00550  Peptidoglycan biosynthesis
sera01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sera00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Ser39006_006140
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Ser39006_006140
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sera01011]
    Ser39006_006140
Enzymes [BR:sera01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Ser39006_006140
Peptidoglycan biosynthesis and degradation proteins [BR:sera01011]
 Precursor biosynthesis
  Amino acid ligase
   Ser39006_006140
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase NAD_binding_3 MATCAP
Other DBs
NCBI-ProteinID: AUH03748
UniProt: A0A2I5TGQ7
LinkDB
Position
1326928..1328415
AA seq 495 aa
MADRNLRDLLAPWVQNAPERALREMTLDSRIAAAGDLFVAIVGHKTDGRHYIPQAIAQGV
SAIIAEADANSPDGTWREIHGVPVIYLSSLNQRLSALAGRFYQQPAEKLKLIGVTGTNGK
TTTTQLLAQWSQTLGEHSAVMGTVGNGLLGHVVPTENTTGSAVDVQQVLSQLVEQGATLA
AMEVSSHGLVQYRVAALPFAAAVFTNLSRDHLDYHGDMAHYEAAKWSLFADHQVGQAIIN
ADDEVGRRWLSQLPDAVAVTMENNLVPGCRGRWLKATRVDYHDSGFTVHIASSWGQGAIN
SRLMGAFNVSNLILALATLLSLGYPLDKLIKTGSTLQPVCGRMEVFHIDGKPTVVVDYAH
TPDALEKALEAARLHCKGKLWCVFGCGGDRDKGKRPLMGGIAEQLADRVIVTDDNPRSEE
PQEIVLEILSGLMDAGRVQVIAGRAEAVTSAVMQASENDVVLVAGKGHEDYQLVGNQRLD
YSDRITVARLLGVIV
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtggccgatcgtaatttgcgcgatttactggctccgtgggtgcagaatgccccggagcgt
gcgctgcgggaaatgacattagacagccgtattgcggctgccggggatctgtttgttgcc
atcgtcgggcataaaacggatgggcggcactatattccgcaggccattgcgcaaggggta
tcagcgataatcgctgaggccgatgctaattctcctgatggtacctggcgtgaaattcac
ggcgtaccagtaatttatctgagtagccttaatcagcgtttatctgcactggcgggacgt
ttttatcagcaacctgctgaaaaattaaagttgattggggtaaccgggactaacggtaaa
accaccacgacacagttactggcgcaatggagccagacattgggtgaacacagtgcagtg
atggggacggtgggaaacgggctattggggcatgtcgtcccgacggaaaataccactggg
tctgcggtagatgttcaacaggtattaagtcagctggtggaacaaggcgcgacgctggcg
gcgatggaagtgtcatcccacggtttggtgcaataccgtgtggcggcgttgcctttcgct
gctgccgtctttaccaatttaagtcgtgatcatctggattaccacggtgatatggcgcat
tacgaagcggcgaaatggtcgttgtttgccgaccatcaggtaggtcaggcgattatcaac
gcggatgatgaagtcggacgccgctggctgagccaactgccggatgcggtcgccgttacg
atggaaaacaatctggtgccgggttgccgtgggcgctggttaaaagcgacgcgggttgat
taccacgacagtggtttcaccgtgcatattgcctccagttggggacaaggtgcgatcaac
agccgactgatgggcgcgtttaatgtcagcaatctgatactcgcgctggctactctgtta
tcgctggggtatccgttagacaaactgatcaagaccggctctacgctacaaccggtgtgc
ggcagaatggaagtttttcatattgacggcaaaccgacggttgttgtcgattatgcacat
acaccggacgccctggaaaaggcgcttgaggccgcacggttacactgcaaagggaaacta
tggtgcgtatttggttgtggtggtgatcgggacaaaggtaagcgcccacttatggggggg
atcgccgagcaactggctgatcgggttatcgtgacggacgacaatccccgtagcgaagaa
ccacaggaaattgtgctggagattctcagcggattgatggatgccggccgtgttcaggtg
attgccggtcgggccgaggcggtgaccagtgcagtgatgcaggcgtcggaaaacgatgtg
gtgctggtggcgggtaaaggacatgaagattatcagctagtaggaaatcagcggctggat
tattcggatcgcattacagtcgctcgtctattgggggtcatcgtatga

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