Prodigiosinella confusarubida ATCC 39006: Ser39006_006140
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Entry
Ser39006_006140 CDS
T05290
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00300
Lysine biosynthesis
sera00550
Peptidoglycan biosynthesis
sera01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ser39006_006140
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ser39006_006140
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Ser39006_006140
Enzymes [BR:
sera01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Ser39006_006140
Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Precursor biosynthesis
Amino acid ligase
Ser39006_006140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
NAD_binding_3
MATCAP
Motif
Other DBs
NCBI-ProteinID:
AUH03748
UniProt:
A0A2I5TGQ7
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Position
1326928..1328415
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AA seq
495 aa
AA seq
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MADRNLRDLLAPWVQNAPERALREMTLDSRIAAAGDLFVAIVGHKTDGRHYIPQAIAQGV
SAIIAEADANSPDGTWREIHGVPVIYLSSLNQRLSALAGRFYQQPAEKLKLIGVTGTNGK
TTTTQLLAQWSQTLGEHSAVMGTVGNGLLGHVVPTENTTGSAVDVQQVLSQLVEQGATLA
AMEVSSHGLVQYRVAALPFAAAVFTNLSRDHLDYHGDMAHYEAAKWSLFADHQVGQAIIN
ADDEVGRRWLSQLPDAVAVTMENNLVPGCRGRWLKATRVDYHDSGFTVHIASSWGQGAIN
SRLMGAFNVSNLILALATLLSLGYPLDKLIKTGSTLQPVCGRMEVFHIDGKPTVVVDYAH
TPDALEKALEAARLHCKGKLWCVFGCGGDRDKGKRPLMGGIAEQLADRVIVTDDNPRSEE
PQEIVLEILSGLMDAGRVQVIAGRAEAVTSAVMQASENDVVLVAGKGHEDYQLVGNQRLD
YSDRITVARLLGVIV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggccgatcgtaatttgcgcgatttactggctccgtgggtgcagaatgccccggagcgt
gcgctgcgggaaatgacattagacagccgtattgcggctgccggggatctgtttgttgcc
atcgtcgggcataaaacggatgggcggcactatattccgcaggccattgcgcaaggggta
tcagcgataatcgctgaggccgatgctaattctcctgatggtacctggcgtgaaattcac
ggcgtaccagtaatttatctgagtagccttaatcagcgtttatctgcactggcgggacgt
ttttatcagcaacctgctgaaaaattaaagttgattggggtaaccgggactaacggtaaa
accaccacgacacagttactggcgcaatggagccagacattgggtgaacacagtgcagtg
atggggacggtgggaaacgggctattggggcatgtcgtcccgacggaaaataccactggg
tctgcggtagatgttcaacaggtattaagtcagctggtggaacaaggcgcgacgctggcg
gcgatggaagtgtcatcccacggtttggtgcaataccgtgtggcggcgttgcctttcgct
gctgccgtctttaccaatttaagtcgtgatcatctggattaccacggtgatatggcgcat
tacgaagcggcgaaatggtcgttgtttgccgaccatcaggtaggtcaggcgattatcaac
gcggatgatgaagtcggacgccgctggctgagccaactgccggatgcggtcgccgttacg
atggaaaacaatctggtgccgggttgccgtgggcgctggttaaaagcgacgcgggttgat
taccacgacagtggtttcaccgtgcatattgcctccagttggggacaaggtgcgatcaac
agccgactgatgggcgcgtttaatgtcagcaatctgatactcgcgctggctactctgtta
tcgctggggtatccgttagacaaactgatcaagaccggctctacgctacaaccggtgtgc
ggcagaatggaagtttttcatattgacggcaaaccgacggttgttgtcgattatgcacat
acaccggacgccctggaaaaggcgcttgaggccgcacggttacactgcaaagggaaacta
tggtgcgtatttggttgtggtggtgatcgggacaaaggtaagcgcccacttatggggggg
atcgccgagcaactggctgatcgggttatcgtgacggacgacaatccccgtagcgaagaa
ccacaggaaattgtgctggagattctcagcggattgatggatgccggccgtgttcaggtg
attgccggtcgggccgaggcggtgaccagtgcagtgatgcaggcgtcggaaaacgatgtg
gtgctggtggcgggtaaaggacatgaagattatcagctagtaggaaatcagcggctggat
tattcggatcgcattacagtcgctcgtctattgggggtcatcgtatga
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