Prodigiosinella confusarubida ATCC 39006: Ser39006_006175
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Entry
Ser39006_006175 CDS
T05290
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00470
D-Amino acid metabolism
sera00550
Peptidoglycan biosynthesis
sera01100
Metabolic pathways
sera01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ser39006_006175 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ser39006_006175 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ser39006_006175 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Ser39006_006175 (ddl)
Enzymes [BR:
sera01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Ser39006_006175 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Precursor biosynthesis
Amino acid ligase
Ser39006_006175 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
ATP-grasp
ATP-grasp_3
RimK
TTL
ATPgrasp_YheCD
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AUH03755
UniProt:
A0A2I5TGQ1
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All DBs
Position
1335981..1336901
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AA seq
306 aa
AA seq
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MTEKVAVLLGGISAEREVSLLSGQAVLSGLKEAGIDAYAVDIRDFPVIHLKDEGFTKAFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKRRTKLVWQASGLPVSPYVVLNRQ
QFLQMDSSRLIQQVAHLGMPLIVKPSREGSSVGMSKVEQADALHSALEEAFHHDDEVLVE
KCLSGPEFTVGILGDEVLPSIRIQATGTFYDYEAKYLSDETQYFCPSGLSDKQEHYLASL
AMDAYQALGCSGWGRVDVMMDSDGAFYLLEVNTSPGMTSHSLVPMAAKQRGFTFSQLVAR
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaagttgctgtactgcttggtggaatctccgctgaacgcgaagtctctttg
ctgtccgggcaggcagttctgtccggtctgaaagaggctggtattgatgcctatgctgtg
gatatccgtgatttcccggtcattcatttaaaggacgagggatttaccaaagcctttatc
gcgctccatgggcgcggtggtgaagacggtactttgcaaggtgtgctggaatttttacaa
ctgccctacactggcagtggtgttatggcctcggcacttacgatggataagcgccgtacc
aaactggtttggcaggcatcaggtttgcctgtttcaccttatgtggtcttgaaccgtcag
cagttcctgcaaatggattcgagccgtttgatacaacaggtggcacatctgggtatgccg
ttgatcgtgaagcccagccgtgaaggttccagcgttggtatgagtaaggttgaacaggct
gatgcgttgcactcagcactggaagaggcctttcaccatgatgatgaggtactggtcgag
aaatgtcttagcggaccggaattcacggttggcattctgggcgatgaggtactgccttct
atacggattcaggcaacaggtactttctatgactacgaggcaaagtacctgtcggatgag
acacagtatttctgcccgagtggcctgtctgacaaacaagagcactacctggcctctctg
gcgatggatgcataccaggctcttggttgcagtggctggggacgagtggatgtgatgatg
gacagcgatggcgcgttttatttactggaagtgaatacgtcgccgggaatgaccagccat
agtctggtgcctatggcggccaaacagcgtggcttcacgttctctcaattggttgccaga
attttggaattggctggttga
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