Prodigiosinella confusarubida ATCC 39006: Ser39006_007455
Help
Entry
Ser39006_007455 CDS
T05290
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_007455
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_007455
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ser39006_007455
Transfer RNA biogenesis [BR:
sera03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Ser39006_007455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AUH03989
UniProt:
A0A2I5T559
LinkDB
All DBs
Position
1627458..1628549
Genome browser
AA seq
363 aa
AA seq
DB search
MSDSFSGKNGKVRVMYVRSDDGDEKNNKNKRPTDNRRNDSGSRDKNPRSSRDNGPRGASQ
DKGREKWPSEKSSDRERPARRDDNTGYDSPWKTVSRAPDETPDHGGIGGKSQIDHEQIRR
QRAEETRVYGENACQALFKSRPEAIIRAWFLQEVTPRFRDALRWMAANRKAYHVVEEDEL
TKASGTEHHGGVCFLIKKRNGMDVSEYLHSVSETDCVLALEDVGNPHNLGGIIRSCAHFG
VNGVLVQDAAQLESGAAVRTAEGGAEHVKAINADDFIDVLSQFRQAGYTIVTTSSHKGTA
LSQTTLPAKMVIVLGQEGDGLSDSAWQQGDMKVSIDGTGKVESLNISVATGILLAEWWRQ
NHH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcattcagtgggaaaaacggcaaagtccgtgtgatgtacgtccgtagcgat
gatggggacgaaaaaaacaataaaaacaaacgtccgacagacaaccgtcgtaatgatagc
ggatcgcgggataaaaatccgcgttcgtcgcgtgacaatggaccgcgtggtgcaagtcag
gataaagggcgtgaaaagtggcctagcgagaagagcagtgatcgcgaacgtccggcgcgt
cgtgatgacaatacgggttatgattcaccgtggaagaccgtctcccgtgcaccagatgaa
acaccggatcatggcggtattggtggtaaaagccagattgaccatgagcagattcgtcgt
caacgggcggaagaaacccgcgtatatggtgaaaatgcttgtcaggcgttatttaaaagt
cgcccagaagcgattatccgggcctggttcctgcaggaagtcacaccgcgcttccgtgat
gcgctgcgttggatggcggcgaatcgtaaagcttatcatgtagttgaagaagacgagcta
actaaagcatcaggtactgaacatcacggtggcgtgtgttttctgatcaagaaacgtaat
ggtatggatgtaagtgaatacttgcacagtgtgagtgagaccgattgcgtactggcattg
gaagatgtaggtaatccacataatctgggtggtatcatacgtagttgtgcgcactttggt
gtgaacggtgtactggttcaggatgcggcgcagctggagtccggtgcggcggtacgtact
gcggaaggtggtgcggaacatgtgaaagccatcaatgccgatgattttattgatgtgctg
tctcagtttcgtcaagctggctataccattgtaacgacatctagccataaagggacggca
ttatcccaaacaacgctgccggccaaaatggtcatcgtgttagggcaggaaggtgatggt
ctttctgacagtgcctggcagcaaggagacatgaaagtctctatcgacggtaccggaaaa
gtggaaagcctgaatatttctgtcgcaacgggtattctgctggcggaatggtggcgtcag
aaccaccattag
DBGET
integrated database retrieval system
