KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_010255
Entry
Ser39006_010255   CDS       T05290                                 
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:sera00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sera03016]
    Ser39006_010255
Enzymes [BR:sera01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     Ser39006_010255
Transfer RNA biogenesis [BR:sera03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Ser39006_010255
SSDB
Motif
Pfam: DAO Methyltransf_30 Pyr_redox_2 NAD_binding_9 NAD_binding_8 FAD_binding_2 FAD_oxidored HI0933_like GIDA Pyr_redox_3 Pyr_redox
Other DBs
NCBI-ProteinID: AUH04468
UniProt: A0A2I5T6F7
LinkDB
Position
complement(2204480..2206498)
AA seq 672 aa
MTALPIQHAVLSWNDQGTPVSQQFDDVYFSNQNGLDETRYVFLQGNHFPVRFFYHSDAVC
TVAETGFGTGLNFLTLWQAFDQFRKQAPHAVLRRLHFISFEKFPLRCHDLAAAHAQWPEL
AHYANELRQQWPMALPGCHRLILAKGAITLDLWFGDINTLLPQLDDSLTHKIDAWFLDGF
APAKNPDMWTENLFGSMARLCRPQGTFATFTAAGFVRRGLQQAGFNVSKIKGFGHKREML
CGTVPEAITALDTTPWYTRPAATDSHDVAIIGGGIASILTALALQRRGTHVTLYCTDDTV
GQGASGNRQGALYPLLNDKHDALSCFFANAFTYARRYYDALAAQGIQFEHQWCGVSQLAY
DDKSARKIAKIIAGHWPLELVADHSAEELTTLVDLPLQTHGITYPQGGWLCPAELTTATL
ALAQQRGLVAQMNTPVKRLVQTSSGWTLVLNEDREENHATVILANGHRLTEWEQTRHLPA
YPVRGQVTHIPTTPRLRQLKQVLCYNGYLTPLSPQHQQHCIGASYQRGDSGTDYREEDQQ
QNHQRLIDCLPDVAWSEDIDISGQLARSGIRCATRDHLPLLGAVPDYQQTVADYQDLPQQ
LATGNASAAAPVHHNLFILGALGSRGLCSAPLAAEILASQIYGEPLPLDKETLAALNPNR
FWIRKLLKSRPV
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtgacagcccttcccattcaacatgctgtactgagttggaacgatcagggtacacctgta
tcgcaacagtttgatgacgtctacttctccaatcagaatggattggatgaaacccgctac
gtctttttacaggggaaccattttccggtacgttttttctaccattccgatgcggtatgt
actgttgcggaaaccgggtttggtactgggttgaattttcttaccttgtggcaggcattt
gatcagtttcgcaaacaggcaccacatgctgtgctgcgtcgacttcatttcatcagtttt
gaaaagtttccgttacgttgccacgatctggccgccgcacatgctcagtggccggagctg
gcacactatgccaatgaattgcgtcaacagtggccaatggcattacccggttgtcatcgt
ctgattctggcaaaaggcgctatcacgctggatttatggttcggtgacatcaatacgttg
ctaccccaattggacgatagtctgacacacaaaattgacgcctggtttctggatggcttt
gccccggccaaaaatccggatatgtggacggagaatctgttcggttcaatggccaggcta
tgtcgtccgcaaggtacgtttgcaaccttcacggcagcgggattcgttcgccgcggacta
caacaagcgggttttaacgtaagtaaaatcaaagggtttggtcataaacgggaaatgcta
tgcggtacagtgccagaagccataacagcactcgataccacgccctggtatacccggcct
gcggcaacagattcccatgatgtggcaattatcggtggtggtatagccagtattctaacg
gcgttggcactgcaacggcgaggaactcacgtcacgctttattgtaccgacgacacggtg
gggcaaggtgcgtcaggcaaccgccagggggcactctacccgctattgaacgataaacac
gatgccctatcctgtttcttcgccaatgcatttacctatgcacggcgctattatgatgcc
cttgccgctcagggcattcaatttgagcaccaatggtgtggtgtaagtcagctggcttac
gatgacaaaagcgcccgcaagatagcaaaaattattgccggtcactggccgttggaactg
gttgccgaccattcagcagaggaattgaccacactcgtcgatttgccgttacaaactcat
ggtatcacctatccacaaggcggctggttatgcccagcagaactgacgaccgccacgtta
gcgctggcacaacagcgtggactggtagcacagatgaataccccggtaaagcgtctggta
cagacttcgtcaggctggacgctggtactcaatgaagatcgggaagagaaccacgccaca
gtgattctggccaacggtcatcgattaacagagtgggaacagacccgacatttacctgcc
tatcccgtccgcggccaggtaacgcatatccccaccaccccacgcttgagacaacttaaa
caggtactctgctacaatggctacctgacaccactcagcccacagcatcagcagcactgt
atcggtgccagttaccagcgtggtgatagcggaacggattaccgcgaagaggatcagcag
cagaaccatcaacggctgattgattgtctgccagatgtcgcctggtcagaagacattgat
atcagcggtcagttggcgcgcagtggtatccgctgcgccactcgcgatcatctgccatta
ttgggagcggtgcctgattatcagcagacagtggcagactatcaggatttaccacaacaa
ctggcgacgggaaacgcgagcgctgccgcgccggttcaccacaacctgtttattctgggg
gcgcttggctcacggggtttatgttcagcaccgctggcggcagaaattctggcatcacag
atatacggtgagccgttgccgctggataaggaaaccctggcagcactcaatccaaaccgc
ttttggataagaaagttgctaaaaagccggccagtgtaa

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