Prodigiosinella confusarubida ATCC 39006: Ser39006_010255
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Entry
Ser39006_010255 CDS
T05290
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sera03016
]
Ser39006_010255
Enzymes [BR:
sera01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Ser39006_010255
Transfer RNA biogenesis [BR:
sera03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Ser39006_010255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_9
NAD_binding_8
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_3
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AUH04468
UniProt:
A0A2I5T6F7
LinkDB
All DBs
Position
complement(2204480..2206498)
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AA seq
672 aa
AA seq
DB search
MTALPIQHAVLSWNDQGTPVSQQFDDVYFSNQNGLDETRYVFLQGNHFPVRFFYHSDAVC
TVAETGFGTGLNFLTLWQAFDQFRKQAPHAVLRRLHFISFEKFPLRCHDLAAAHAQWPEL
AHYANELRQQWPMALPGCHRLILAKGAITLDLWFGDINTLLPQLDDSLTHKIDAWFLDGF
APAKNPDMWTENLFGSMARLCRPQGTFATFTAAGFVRRGLQQAGFNVSKIKGFGHKREML
CGTVPEAITALDTTPWYTRPAATDSHDVAIIGGGIASILTALALQRRGTHVTLYCTDDTV
GQGASGNRQGALYPLLNDKHDALSCFFANAFTYARRYYDALAAQGIQFEHQWCGVSQLAY
DDKSARKIAKIIAGHWPLELVADHSAEELTTLVDLPLQTHGITYPQGGWLCPAELTTATL
ALAQQRGLVAQMNTPVKRLVQTSSGWTLVLNEDREENHATVILANGHRLTEWEQTRHLPA
YPVRGQVTHIPTTPRLRQLKQVLCYNGYLTPLSPQHQQHCIGASYQRGDSGTDYREEDQQ
QNHQRLIDCLPDVAWSEDIDISGQLARSGIRCATRDHLPLLGAVPDYQQTVADYQDLPQQ
LATGNASAAAPVHHNLFILGALGSRGLCSAPLAAEILASQIYGEPLPLDKETLAALNPNR
FWIRKLLKSRPV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcccttcccattcaacatgctgtactgagttggaacgatcagggtacacctgta
tcgcaacagtttgatgacgtctacttctccaatcagaatggattggatgaaacccgctac
gtctttttacaggggaaccattttccggtacgttttttctaccattccgatgcggtatgt
actgttgcggaaaccgggtttggtactgggttgaattttcttaccttgtggcaggcattt
gatcagtttcgcaaacaggcaccacatgctgtgctgcgtcgacttcatttcatcagtttt
gaaaagtttccgttacgttgccacgatctggccgccgcacatgctcagtggccggagctg
gcacactatgccaatgaattgcgtcaacagtggccaatggcattacccggttgtcatcgt
ctgattctggcaaaaggcgctatcacgctggatttatggttcggtgacatcaatacgttg
ctaccccaattggacgatagtctgacacacaaaattgacgcctggtttctggatggcttt
gccccggccaaaaatccggatatgtggacggagaatctgttcggttcaatggccaggcta
tgtcgtccgcaaggtacgtttgcaaccttcacggcagcgggattcgttcgccgcggacta
caacaagcgggttttaacgtaagtaaaatcaaagggtttggtcataaacgggaaatgcta
tgcggtacagtgccagaagccataacagcactcgataccacgccctggtatacccggcct
gcggcaacagattcccatgatgtggcaattatcggtggtggtatagccagtattctaacg
gcgttggcactgcaacggcgaggaactcacgtcacgctttattgtaccgacgacacggtg
gggcaaggtgcgtcaggcaaccgccagggggcactctacccgctattgaacgataaacac
gatgccctatcctgtttcttcgccaatgcatttacctatgcacggcgctattatgatgcc
cttgccgctcagggcattcaatttgagcaccaatggtgtggtgtaagtcagctggcttac
gatgacaaaagcgcccgcaagatagcaaaaattattgccggtcactggccgttggaactg
gttgccgaccattcagcagaggaattgaccacactcgtcgatttgccgttacaaactcat
ggtatcacctatccacaaggcggctggttatgcccagcagaactgacgaccgccacgtta
gcgctggcacaacagcgtggactggtagcacagatgaataccccggtaaagcgtctggta
cagacttcgtcaggctggacgctggtactcaatgaagatcgggaagagaaccacgccaca
gtgattctggccaacggtcatcgattaacagagtgggaacagacccgacatttacctgcc
tatcccgtccgcggccaggtaacgcatatccccaccaccccacgcttgagacaacttaaa
caggtactctgctacaatggctacctgacaccactcagcccacagcatcagcagcactgt
atcggtgccagttaccagcgtggtgatagcggaacggattaccgcgaagaggatcagcag
cagaaccatcaacggctgattgattgtctgccagatgtcgcctggtcagaagacattgat
atcagcggtcagttggcgcgcagtggtatccgctgcgccactcgcgatcatctgccatta
ttgggagcggtgcctgattatcagcagacagtggcagactatcaggatttaccacaacaa
ctggcgacgggaaacgcgagcgctgccgcgccggttcaccacaacctgtttattctgggg
gcgcttggctcacggggtttatgttcagcaccgctggcggcagaaattctggcatcacag
atatacggtgagccgttgccgctggataaggaaaccctggcagcactcaatccaaaccgc
ttttggataagaaagttgctaaaaagccggccagtgtaa
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