Prodigiosinella confusarubida ATCC 39006: Ser39006_019000
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Entry
Ser39006_019000 CDS
T05290
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00190
Oxidative phosphorylation
sera00860
Porphyrin metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Ser39006_019000
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Ser39006_019000
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sera01006
]
Ser39006_019000
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sera03029
]
Ser39006_019000
Enzymes [BR:
sera01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Ser39006_019000
Prenyltransferases [BR:
sera01006
]
Compound prenylation
Protoheme farnesyltransferase
Ser39006_019000
Mitochondrial biogenesis [BR:
sera03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Ser39006_019000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF3040
Motif
Other DBs
NCBI-ProteinID:
AUH06917
UniProt:
A0A2I5TQS8
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All DBs
Position
4178938..4179828
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AA seq
296 aa
AA seq
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MIKQYLQVTKPGIIFGNLISVIGGFLLAAKGVIDYPLFTATLIGVSLVVASGCVFNNVID
RDIDKKMERTKNRVLVKGLIPLKVTLVYASLLGIAGFALLYIAANPLAMWLAVMGFVVYV
GIYSLYMKRHSVYGTLVGSLSGAAPPVIGYCAVSNQFDAGAFILLLIFSLWQMPHSYAIA
IFRFKDYQAANIPVLPVVKGISVAKNHITLYILAFMIATLMLSIGGYAGYKYLIVAAAVS
VWWLGMALSGYKKPTNDRVWARKLFVFSIVAITSLSIMMSVDSIAPAQEALLTYLH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaatacctgcaggtcaccaaaccaggaattatttttggtaatctaatttct
gttattggcggttttttactggcagccaagggggtcattgattatcccttgtttactgcg
acgctgattggtgtgtcactggttgtcgcatcaggttgtgtctttaacaacgtaatcgat
cgtgacatcgacaaaaaaatggagagaaccaagaacagagtgctggttaagggacttatt
ccactgaaggtaactctggtttacgcgtctctgttaggtattgctggttttgcactactg
tacatcgcagcaaatccactggccatgtggttggcagtgatgggttttgtggtttatgtc
ggcatatatagtctttatatgaaacggcattctgtctacggcacattggttggcagttta
tccggggctgcgcctccggtaattggttattgtgcagtcagcaatcagtttgatgcgggc
gcctttatcctgttactgattttcagtctttggcagatgccacattcctatgccatagct
attttccgttttaaagattatcaggcagccaatattcccgtgttaccggtggtaaaaggt
atctcggtcgctaaaaatcatatcacgctctacattctggcattcatgattgccacgctg
atgctgtctatcggcggttatgcgggttataagtatttaattgttgctgcggctgtcagc
gtgtggtggctgggaatggcactttccggttataaaaaacccactaatgaccgggtatgg
gcgcgaaaattatttgtgttctctattgtggcgattacttcattaagcatcatgatgtcc
gtagactccatcgctccggcacaagaagcattactcacctacctgcactga
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