Serratia sp. FS14: L085_22850
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Entry
L085_22850 CDS
T03313
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
serf
Serratia sp. FS14
Pathway
serf03420
Nucleotide excision repair
serf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L085_22850
03430 Mismatch repair
L085_22850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_22850
Enzymes [BR:
serf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L085_22850
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L085_22850
MMR (mismatch excision repair)
Other MMR factors
L085_22850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIA49967
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Position
4953625..4955499
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AA seq
624 aa
AA seq
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MSRLEVIIPDDEIDMSADAEIRKCLDLSSPKSFFLFAGAGSGKTRSLVSALQYVRDTFGD
ELRLKGQRVAVITYTNAASEEIQRRLDFDPTIDVSTIHSFAWSLIEGLNRDIREWLRAKI
TTDITKLEAEEAKGRKGTEASRTRLKKIASRTKRLQSLDNVKRFVYSPTGENLGRDSLNH
AEVIHLTAYFLTTKPTMQNILIGRNPILLIDESQDTNKLLIDALFAVQAQHKETFVLGLI
GDMMQRIYSDGKDGLDNNLPADWATPGKQMNHRCPKRIVKLINAVRSAVDKQVQRPRTNS
LEGSVRLFVLPSHTVDKPAAERKIAMHMAEVADDEQWRNLALCKCLTLEHHMAASRLGFL
ELFAPLYSVKSWRTNLLDGSLPCVRFFTDEMLPLIQAKFAEDRFAIARILKKRSSLVSPD
ALQYATDQRSQLKLASAALERLMTLFAQGADPSLGDVLRFVADSALLPIPESLLLSVTSD
NTPSNVTPHVDESDADHQTERTAAIGEFLLAPFSQVEKFASYVSGKAPFDTHQGVKGLEF
ERVMVIMDDEEARGFMFKYENLFGAKSVADPSVEAVRRLFYVTCSRAQQSLALVAYATSP
EQVRQFVINQDWFNAGEIVIGIPE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggctggaagtgataattcccgacgatgagatagacatgtcggctgatgcggaa
atcagaaaatgtcttgacctcagctccccaaaaagtttctttctttttgccggcgccggt
tcaggaaagacaaggtcgttggtatccgctctccagtatgtgcgcgacaccttcggggat
gaacttcggctgaaaggacaacgagtcgctgtcatcacttataccaatgcggcgagcgaa
gaaattcaacgccgcctggattttgatccaactatagacgtttcgactatacatagcttc
gcctggtctctgatagaagggcttaaccgtgatatccgtgaatggcttcgcgcgaaaata
accaccgatatcacaaagcttgaagcagaagaagcaaaagggagaaaaggtacggaagca
tcaagaacccgcttaaaaaaaatcgcctcgagaaccaaacgccttcaaagcctcgataac
gttaaacgcttcgtttacagcccaaccggagaaaatctcggccgcgactcgctgaaccat
gccgaagtgattcatctcaccgcctattttttaacaacaaaaccgaccatgcagaacatc
ttgatcggccgtaaccccattctgcttatcgatgagagtcaggataccaataaacttctg
atagatgccttatttgccgttcaggctcaacataaagagacattcgttctcggcctgatt
ggtgacatgatgcagcgtatttatagcgatggtaaagacggactggataacaatctgcct
gccgactgggcaacccccggaaaacagatgaatcaccgttgcccaaaacgcatcgtaaaa
ttaattaacgccgtacgtagcgcagtggacaaacaggtacaacggccacgaaccaacagc
cttgaaggcagcgtgaggcttttcgtccttcctagtcataccgttgataaacctgctgcc
gagcgaaaaattgcgatgcatatggccgaggttgccgatgatgaacaatggcggaatttg
gcactctgcaaatgcctcacattggagcaccacatggccgccagtcggttaggcttttta
gagctgtttgcccctttgtatagcgtgaaaagttggcgaaccaatcttctcgatggatct
ttgccctgcgttcgattctttactgatgagatgctgccattaattcaggcaaagtttgcc
gaagaccgttttgccatcgccagaattctaaaaaaacgatcgtcgctagtcagcccagat
gccttgcaatacgcaacagatcaacgctcgcaactgaagttagcatcggcagcactggaa
cgccttatgacgctgttcgcacagggtgctgatccttcgcttggcgatgtccttcgtttc
gtagcggatagcgcgctcttgcctattcctgaatctctgctgctcagcgtaacgagcgat
aatacgccatctaacgtaacaccgcatgtcgatgaaagtgatgccgaccaccagactgag
cgtacagcggcgataggcgagtttttacttgcacccttctctcaggtcgagaaatttgca
tcctacgtatctggaaaagcgcctttcgatacgcaccaaggcgtgaaagggctggaattt
gagagagtgatggtcattatggacgatgaagaagcccggggttttatgttcaaatatgag
aaccttttcggggcgaaaagcgtggccgatccctcggttgaagcggttcgccgactgttc
tacgttacctgcagcagggcgcagcaaagcttggctctcgtggcctatgcaacgtcaccg
gaacaagttcgccaattcgtgataaaccaagactggtttaatgctggtgaaattgtcatc
ggaataccagagtaa
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