Serinicoccus hydrothermalis: SGUI_3141
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Entry
SGUI_3141 CDS
T04436
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGUI_3141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serj03400
]
SGUI_3141
Enzymes [BR:
serj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SGUI_3141
DNA repair and recombination proteins [BR:
serj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SGUI_3141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Anti-TRAP
zinc_ribbon_10
zinc_ribbon_4
Motif
Other DBs
NCBI-ProteinID:
ANS80537
UniProt:
A0A1B1NGH4
LinkDB
All DBs
Position
complement(3420952..3421791)
Genome browser
AA seq
279 aa
AA seq
DB search
MWRTARRLHQGLAGQVLEGSDLRVPAHATADLSGRRTLEVVPRGKHLLHRVEGDVTVHSH
LRMEGSWRVHPVARRHALGRRHTVRALLWTPQRVAVGDSLGMLELVRTSEEHRVVGHLGP
DLLDPGYDADLALANVLADPARTITEACLDQRNVAGMGTIFTAEPLFLLGINPWTPVGDL
EEAQVAELLATARRLLVLSCRVGRTTITGRGDVNDDDAWVHGRMGLPCKRCGTTIRLAPI
GVQPQQRVMFSCPTCQGGRAPTDDGRPQSPLGHGRRPSY
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgtggcggaccgcccggcggctgcaccagggtctggccgggcaggtcctggaggggtcg
gacctgcgcgtccccgcgcacgccaccgccgacctgtccggccgccgcaccctggaggtg
gtgccgcgcggcaagcacctgctgcaccgggtcgagggtgacgtcaccgtgcacagccac
ctgcggatggagggctcctggcgggtccacccggtggcgcgccggcacgcgctggggcga
cggcataccgtccgggcgctgctgtggacgccgcagcgggtcgccgtgggcgactccctg
gggatgctggagctggtccgcaccagcgaggagcaccgggtcgtgggccacctggggccg
gacctgctcgaccccggctacgacgccgacctcgcgctggccaacgtgctggccgacccg
gcacgcaccatcaccgaggcctgcctggaccagcgcaacgtcgcgggcatgggcacgatc
ttcaccgccgagccgctcttcctgctcgggatcaacccctggacccccgtcggcgacctc
gaggaggcgcaggtggccgagctgctggccaccgcgcgccggctgctcgtgctcagctgc
cgggtcgggcggacgacgatcaccgggcgcggcgacgtcaacgacgacgacgcctgggtg
cacgggcgcatgggcctgccctgcaagcgttgcggcaccaccatccgactcgcccccatc
ggggtccagccgcagcagcgggtgatgttctcctgcccgacctgccagggaggacgtgcc
cccaccgacgacggccggccgcagtcaccgctgggccacgggcggcggccgagctactga
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