Serratia sp. MYb239: CLM71_07300
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Entry
CLM71_07300 CDS
T05477
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00521
Streptomycin biosynthesis
serm00523
Polyketide sugar unit biosynthesis
serm00541
O-Antigen nucleotide sugar biosynthesis
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01250
Biosynthesis of nucleotide sugars
Module
serm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CLM71_07300 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLM71_07300 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLM71_07300 (rfbD)
Enzymes [BR:
serm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CLM71_07300 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AVJ16949
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Position
1532653..1533516
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AA seq
287 aa
AA seq
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MKVLLTGSKGQLGSCFQDRLPQGWEVWATDSEQLDITDGVKVHEAVLRFKPDVIVNAAAY
TAVDKAESEHELAALINEIGPCNLALAAKEAGARLIHVSTDYVFDGSAKTPYVESAATNP
LGVYGKTKLAGEQAVIAALPDAIIIRTAWVYSEYGNNFVKTMLRLGQERDSLGVVSDQYG
CPTYAGDIAAAIIELLKNNVKGGIYHYCGSEDMSWFDFAKKIFELASETQLLNKNVIVNS
IGTKDFKTLAARPQYSVLSNEKIGKVGVHGVSLSTSLIFVLHRIKNK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattgctaaccggttcgaaggggcagttggggagctgttttcaagaccgtttg
cctcaggggtgggaggtttgggcgacagactcagagcaactggatatcactgacggtgtg
aaagtccacgaggctgtattacgttttaagcccgatgttattgtgaatgcagcagcttat
accgctgttgataaagccgaatctgaacatgagctggcggctttaattaacgagattggg
ccgtgtaatctggctttggcggcaaaagaggctggggcgcgtttaattcacgtatctact
gattatgtctttgatggttcggcaaagacaccctatgttgaaagtgcggcaaccaaccct
cttggtgtttatggcaaaaccaagttagcaggtgaacaggccgtgatagctgctctaccg
gacgcaattatcattcgtacggcttgggtctatagcgagtacggaaataactttgttaag
accatgctgcgtttgggtcaggaacgggactccttgggggttgtttcagatcaatatggt
tgccctacttacgcgggggatattgctgccgcaattattgagcttttaaagaataatgtt
aaaggtggtatttaccattattgtggttcagaggatatgagttggtttgactttgccaag
aaaattttcgaattggctagtgaaactcagcttctaaataaaaatgtcattgttaatagt
ataggcacaaaagattttaaaactttagctgcaaggccccaatattctgtcttatcaaat
gaaaagattggtaaggttggcgtgcatggagttagtttatccacaagtctcatattcgtt
ttgcatagaatcaaaaataaatga
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