Serratia sp. MYb239: CLM71_08875
Help
Entry
CLM71_08875 CDS
T05477
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00860
Porphyrin metabolism
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
serm01240
Biosynthesis of cofactors
Module
serm_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
serm_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CLM71_08875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serm04147
]
CLM71_08875
Enzymes [BR:
serm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
CLM71_08875
Exosome [BR:
serm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CLM71_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AVJ20044
LinkDB
All DBs
Position
complement(1866872..1867843)
Genome browser
AA seq
323 aa
AA seq
DB search
MMNSLPTRLRRLRSSEARRSLFQEDELRLSDLVLPIFVEEGTSEYLELNALPGIKRIPES
RLAFELEKYAKSGIRSIMTFGVSHHKDDIGSDTWDENGLVSRMARICKDTVPEMILMSDT
CFCEYTTHGHCGVVHDHSVDNDATLLNLQKQAVAAAHAGADFIAPSAAADGQVQAIRQAL
DEAGFGNTGIISYSTKFASSLYGPFREAGGSELKGDRKTYQMNPMNRREALRESLIDEAE
GADALMVKPASYYLDVIRDIRNASTLPVAAYQVSGEYAMIKFAAAAGAIDEAQVVRESLS
SIKRAGADFIFSYFAADLAQQGL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
attatgaattccctgccaacccgcctgcgccgcctgagaagttccgaggcgcgtcgctcc
ctgttccaggaagatgaattacggctgtccgacctggtgttgcctatcttcgttgaggaa
ggcacctcggaatatctggagctgaacgcactgccgggcatcaaacgcatccctgaatcc
agactggcttttgagctggaaaaatacgcgaaaagcggtattcgcagcattatgacattc
ggggtatctcaccataaagacgatatcggcagcgatacctgggacgagaacggtctggtg
tcgcgtatggcccgtatctgcaaagataccgtgccggaaatgatcctgatgtcggacacc
tgtttttgcgaatacaccacccacggccactgcggcgtggtccacgaccactccgtcgac
aatgatgcaacgctgctgaacctgcagaaacaggcagtggcggcggcacatgccggcgcg
gactttatcgccccttctgccgcagcggacggccaggttcaggccatccgtcaggcgctg
gacgaagccggcttcggcaataccggcattatctcttattccaccaagttcgcctcttcc
ctgtacgggccattccgcgaggccggcggcagcgaactgaaaggcgatcgtaaaacctac
cagatgaacccgatgaaccggcgggaagcgctgcgcgagtcgctgattgacgaagccgaa
ggcgctgacgcgctgatggttaaaccggccagctattacctggatgtcatccgcgatatc
cgcaacgccagcactctgccggttgcggcctatcaggtcagcggggagtacgcgatgatt
aaattcgccgctgccgcgggcgcgatcgatgaagctcaggtggtacgcgagtcgctgtcg
tcaatcaaacgcgccggcgcggactttatcttctcttacttcgccgccgatctggcgcag
caagggctgtaa
DBGET
integrated database retrieval system
