Serratia sp. MYb239: CLM71_13255
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Entry
CLM71_13255 CDS
T05477
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00540
Lipopolysaccharide biosynthesis
serm01100
Metabolic pathways
serm01250
Biosynthesis of nucleotide sugars
Module
serm_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CLM71_13255
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
serm01005
]
CLM71_13255
Enzymes [BR:
serm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CLM71_13255
Lipopolysaccharide biosynthesis proteins [BR:
serm01005
]
Lipid A
CLM71_13255
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVJ18027
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Position
complement(2757151..2758005)
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AA seq
284 aa
AA seq
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MKQKVISIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMRIFEELKQTFGVKTITDVHEAAQAQPVAEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVEKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNATGGHPVIFDVTHALQTRDPFGAASGGRRAQVTELARAGMAVGLAGLFIEA
HPDPNNAKCDGPSALPLDKLEPFLVQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtgattagcattggcgacatcaacgtagcgaacgacctgccgtttgtg
ctgttcggtggtatgaacgtgcttgaatcgcgcgatttggcgatgcgcatctgcgaacac
tacgtcacggtgacgcaaaaactgggtattccttacgtcttcaaggcttcatttgataaa
gccaaccgctcttccattcactcttatcgcgggccgggcctggaagaggggatgcgtatt
tttgaagagttgaagcaaaccttcggcgtaaaaaccatcaccgacgtgcatgaggctgct
caggctcagccagtggcggaagtggttgatgtcattcagctgcctgcgtttttggcgcgt
cagaccgacctggtggaagcgatggcgaaaaccggcgcggtgatcaacgttaaaaaacca
cagtttgtcagcccgggccagatgggcaatatcgtggagaaattcaaagaaggcggcaac
gaccaggttattctgtgcgaccgcggcagcaactttggctatgacaacctggtggttgat
atgttgggcatcaacgtgatgaagaacgccaccggcggccatccggtgattttcgacgtg
acccatgcgctgcaaacccgcgacccgtttggcgccgcttccggcggtcgtcgcgctcag
gtaactgaactggcgcgcgccggtatggcggtgggcctggccggcctgtttattgaggcg
cacccggatccgaacaacgccaagtgcgacggcccgtcagcgctgccgctggataagctg
gagccgttcctggtacagatgaaggcgatcgacgatctggtgaaaagtttcccggaactc
gataccagcaactga
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