Serratia sp. MYb239: CLM71_20670
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Entry
CLM71_20670 CDS
T05477
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM71_20670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_20670
Enzymes [BR:
serm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CLM71_20670
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM71_20670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVJ19378
LinkDB
All DBs
Position
complement(4346071..4346544)
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AA seq
157 aa
AA seq
DB search
MHGTKVGLFTGLSSAHRGYPFANASNRFWKVIHLAGFTARQLAPEEWQQLQEYGCGITAL
VARPTVAASELAREELRRGGEALSDKILRCQPRALAILGKQAFSDAFGIRKVSWGRQALM
IGDTEVWVLPNPSGLNRATLESLTDSYRQLASALENR
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
gtgcatggaactaaagtgggtctatttacaggcctttcttccgcccaccgcggctatccg
tttgccaatgccagcaaccgtttctggaaggtgattcatctggcggggtttaccgcccgc
cagctggcgccggaggagtggcagcagctgcaggaatacggctgcggcattacggcgctg
gttgcgcgtccgacggtggcggccagcgagctggcgcgtgaggaactgcgccgcggcggc
gaggcgttaagcgataaaattctgcgctgtcagccgcgcgcactggcgattctcggcaaa
caggcgttcagcgatgccttcggcatccgcaaggtgagctgggggcgacaggcgctgatg
attggcgataccgaggtgtgggtgctgcccaatcccagcgggcttaaccgtgcgacgctg
gagtcgctgacggacagctatcgtcagctggcgtcggcgttggaaaacagataa
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