KEGG   Serratia sp. MYb239: CLM71_20670
Entry
CLM71_20670       CDS       T05477                                 
Name
(GenBank) G/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
serm  Serratia sp. MYb239
Pathway
serm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:serm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLM71_20670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:serm03400]
    CLM71_20670
Enzymes [BR:serm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     CLM71_20670
DNA repair and recombination proteins [BR:serm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLM71_20670
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AVJ19378
LinkDB
Position
complement(4346071..4346544)
AA seq 157 aa
MHGTKVGLFTGLSSAHRGYPFANASNRFWKVIHLAGFTARQLAPEEWQQLQEYGCGITAL
VARPTVAASELAREELRRGGEALSDKILRCQPRALAILGKQAFSDAFGIRKVSWGRQALM
IGDTEVWVLPNPSGLNRATLESLTDSYRQLASALENR
NT seq 474 nt   +upstreamnt  +downstreamnt
gtgcatggaactaaagtgggtctatttacaggcctttcttccgcccaccgcggctatccg
tttgccaatgccagcaaccgtttctggaaggtgattcatctggcggggtttaccgcccgc
cagctggcgccggaggagtggcagcagctgcaggaatacggctgcggcattacggcgctg
gttgcgcgtccgacggtggcggccagcgagctggcgcgtgaggaactgcgccgcggcggc
gaggcgttaagcgataaaattctgcgctgtcagccgcgcgcactggcgattctcggcaaa
caggcgttcagcgatgccttcggcatccgcaaggtgagctgggggcgacaggcgctgatg
attggcgataccgaggtgtgggtgctgcccaatcccagcgggcttaaccgtgcgacgctg
gagtcgctgacggacagctatcgtcagctggcgtcggcgttggaaaacagataa

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