Prodigiosinella confusarubida ATCC 39006: CWC46_02940
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Entry
CWC46_02940 CDS
T05968
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq03030
DNA replication
serq03430
Mismatch repair
serq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC46_02940
03430 Mismatch repair
CWC46_02940
03440 Homologous recombination
CWC46_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serq03032
]
CWC46_02940
03400 DNA repair and recombination proteins [BR:
serq03400
]
CWC46_02940
Enzymes [BR:
serq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC46_02940
DNA replication proteins [BR:
serq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC46_02940
DNA repair and recombination proteins [BR:
serq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC46_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AUG98864
UniProt:
A0A2I5T2U2
LinkDB
All DBs
Position
635528..636628
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AA seq
366 aa
AA seq
DB search
MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVSEGMLSLTGTDLEMEMVARVALA
QPHEPGATTVPARKLFDICRGLPEGAEIAIALEGDRMLVRSGRSRFSLSTLPATDFPNLD
DWQSDVEFSLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
AMPVGQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGTNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLDASCDLLKQAFSRAAILSNEKFRGVRLYLNHNQLKITANNPEQE
EAEEILDVQYDGTEMEIGFNVSYVLDVLNALKCEGVRLLLTDSVSSVQIEDSASQAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgttgaacgtgagcatctgttaaaaccattgcaacaggtcagcagtccc
ctcgggggtcggccgacgttgccgatcctgggtaatctgctgttgcaggtgagtgaagga
atgctgtcattgaccggcactgatcttgaaatggagatggtggcgcgtgttgcgctggcc
cagccgcatgaaccgggcgcaaccactgtgccggcgcgcaagctgtttgatatctgccgg
ggtctgccggaaggtgccgagattgccatcgcactggaaggtgatcggatgttggtgcgt
tctggtcgtagccgtttttcattatctactttaccggcgacggattttcccaatctggac
gactggcagagtgatgtggaattttctctgccgcaggccacgctcaagcggctgattgag
tccacccagttttcaatggcacatcaggacgtgcgctattacctcaacggtatgttgttt
gaaaccgaaggcgaggaattgcgtactgtcgcgactgatggacaccgtctggcggtgtgt
gccatgcctgtagggcaatctttgccatcacattcggtgatcgtgccgcgtaaaggcgtg
atggagttggtgcgtttgctggatggcggggacacgccgttacagttgcagattggtact
aataatatccgtgcccatgtgggggattttattttcacttccaagctggtggatggccgt
ttccctgattatcggcgtgtattgccgaagaaccctgacaaaacgctggacgccagttgc
gatttgctcaagcaggctttctcccgagcagctattctctctaatgagaagtttcgcggt
gtgcgtctgtacctgaatcataaccagttgaaaatcacggctaataaccctgagcaggaa
gaagccgaagagatcctggacgtgcagtatgacggcacggaaatggaaattggctttaat
gtcagttatgtactggatgtgcttaacgcactgaaatgtgaaggggttcgtctgttgctg
acggattctgtttccagcgtgcaaatcgaagatagcgccagtcaggcggcggcctatgtg
gtgatgccgatgcgtctgtag
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