Prodigiosinella confusarubida ATCC 39006: CWC46_05975
Help
Entry
CWC46_05975 CDS
T05968
Name
(GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serq03009
]
CWC46_05975
03016 Transfer RNA biogenesis [BR:
serq03016
]
CWC46_05975
Enzymes [BR:
serq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CWC46_05975
5.4.99.29 23S rRNA pseudouridine746 synthase
CWC46_05975
Ribosome biogenesis [BR:
serq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWC46_05975
Transfer RNA biogenesis [BR:
serq03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CWC46_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AUG99399
UniProt:
A0A2I5TGQ4
LinkDB
All DBs
Position
complement(1289258..1289911)
Genome browser
AA seq
217 aa
AA seq
DB search
MEPYNPPADPWLHILYQDQHIMVVNKPSGLLSVPGRAPEHKDSIMSRIQADFPQAESVHR
LDMATSGVMVVALNKAAERELKRQFREREPKKSYLARVWGTLEQDEGMVDLPLICDWPNR
PKQKVCFEQGKAAQTEYQVLARDDDGTTRVKLMPITGRSHQLRVHMLALGHPILGDGFYA
HPAAKALAPRLLLHAQELCITHPAFLTPMHFRCEADF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttataatccccccgcagatccctggctgcacatcctgtatcaggaccagcac
attatggtggtcaacaaacctagcggactgctatccgtccctggccgtgcgccggagcac
aaagacagtatcatgagccgtattcaggctgattttccgcaagccgaatcggtgcatcgt
ctggatatggcgaccagtggtgtgatggtggttgccctgaacaaagcggcagagcgggaa
ctaaaacgccagtttcgcgagcgtgagccaaagaaatcttacctcgcccgtgtttgggga
accctggaacaggatgaaggcatggtggacctcccgttgatttgcgactggccgaaccgc
ccgaagcaaaaagtctgttttgaacaaggcaaggcagcacaaactgaatatcaggtactg
gcgcgcgacgacgatggcaccacacgggttaaactgatgcctatcaccgggcgttctcac
caattacgggttcatatgctggccttgggacaccctattctgggagatggcttttatgcc
catccagcagccaaagcgttggcaccacgcctgttactgcacgcccaggaattgtgcatc
actcatccggcatttctcactccgatgcactttcgttgtgaagccgatttttaa
DBGET
integrated database retrieval system
