Serratia sp. SCBI: SERRSCBI_07105
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Entry
SERRSCBI_07105 CDS
T03314
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00260
Glycine, serine and threonine metabolism
sers01100
Metabolic pathways
Module
sers_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SERRSCBI_07105
Enzymes [BR:
sers01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
SERRSCBI_07105
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Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
DAO
FAD_binding_2
Lycopene_cycl
NAD_binding_8
Pyr_redox_2
Thi4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AIM21043
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All DBs
Position
1546466..1548133
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AA seq
555 aa
AA seq
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MEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRMDFRTQMPAALAFPLQGRRY
NWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWAKAPGLEDWTYLD
CLPYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNELFHAMVEAGVQAGYPRTDDLNGYQ
QEGFGPMDRTVTPKGRRASTARGYLDQARSRPNLKIVTHALTDHIVFDGKRAVGVNYLQG
DSNQLTHAKARREVLLCAGAIASPQILQRSGVGPAALLKSLDINVVHDLPGVGENLQDHL
EMYLQYACKKPVSLYPALQWFNQPKIGAEWLFNGTGVGASNQFEAGGFIRSRAEFAWPNI
QYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRVQVKSKDPRQHPSILFNYMATEQD
WQEFRDAIRITREIMAQPALDEYRGREISPGPDVQTDEQLDAFVREHAETAFHPSCSCKM
GEDEMAVVDGQGRVHGMEGLRVVDASIMPLIITGNLNATTIMIAEKIADRIRQRAPLPRS
TADYYVAGDAPVRKQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgactacatcattatcggtgccggttcagccggcaacgtgttagccacccga
ttgaccgaggacgccgacgtcagcgtcctgctgctggaagccggcggcccggattaccgg
atggatttccgtacccagatgccggccgcgctggcgtttccgctgcagggccgccgctat
aactgggcgtatgaaaccgatcctgagccgcacatgaacaaccgccgaatggaatgcggc
cgcggcaaagggctgggcggttcatccctgatcaacggcatgtgttacattcgcggcaac
gcgatggacttcgacaactgggccaaggcgccgggtctggaagactggacctatctggac
tgcctgccgtatttccgcaaggcggaaacgcgcgatatcggcccgaacgattaccacggc
ggcgatggcccggtgagcgtcaccacgccgaaggccggtaacaacgaactgttccacgcc
atggtggaagccggcgtgcaggcgggctatccgcgcaccgacgatctgaacggctatcag
caggaagggttcggcccgatggaccgcaccgtgacgccgaaagggcgccgcgccagcacc
gcccgcggttatctggatcaggcccgttcacggccgaacctgaagatcgttacccatgcg
ctgaccgaccacatcgtgttcgacggcaagcgcgcagtgggcgttaactatctgcagggc
gacagcaatcaactgacccatgccaaagcgcgccgcgaagtgctgctgtgcgccggcgcc
atcgcctcgccgcaaattctgcagcgttcgggcgtcggcccggcggcgctgctgaaaagt
ctggatattaatgtggtacacgatctgccgggcgtcggggaaaacctgcaggaccacctg
gagatgtacctgcaatacgcctgtaagaaaccggtatcgctgtacccggcgctgcaatgg
ttcaaccagccgaagatcggcgcggaatggctgttcaacggcaccggcgttggtgccagc
aaccagttcgaggccggtggcttcatccgcagccgtgcagagttcgcctggccgaacatt
cagtatcacttcctgccggtggcgattaactacaacggcagcaacgcggtgaaagagcac
ggcttccaggcgcacgtcggctcgatgcgttcgccgagccgcggccgggtgcaggtgaaa
tcgaaagatccgcgtcagcacccgagcattctgttcaactacatggcgaccgaacaggat
tggcaggagttccgcgacgctattcgcatcacgcgcgagatcatggcgcagccggccctg
gacgaatatcgtggccgcgagataagccctgggccggacgtgcagaccgatgagcagttg
gatgccttcgtgcgtgagcatgccgaaaccgcgttccacccgtcctgctcgtgcaagatg
ggcgaagacgagatggcggtggtcgacggccagggccgggtgcacggcatggaaggattg
cgggtggtggatgcgtcgattatgccgctgatcattaccggcaacctgaacgccaccacc
atcatgatcgccgaaaagatcgccgaccgcattcgccagcgcgcgccgttgccgcgcagc
accgccgactactacgtcgccggcgatgcgccggtgcgcaagcagtaa
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