Serratia sp. SCBI: SERRSCBI_11615
Help
Entry
SERRSCBI_11615 CDS
T03314
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00061
Fatty acid biosynthesis
sers00071
Fatty acid degradation
sers01100
Metabolic pathways
sers01212
Fatty acid metabolism
sers02024
Quorum sensing
Module
sers_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SERRSCBI_11615
00071 Fatty acid degradation
SERRSCBI_11615
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SERRSCBI_11615
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sers01004
]
SERRSCBI_11615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sers04147
]
SERRSCBI_11615
Enzymes [BR:
sers01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SERRSCBI_11615
Lipid biosynthesis proteins [BR:
sers01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SERRSCBI_11615
Exosome [BR:
sers04147
]
Exosomal proteins
Exosomal proteins of breast milk
SERRSCBI_11615
Exosomal proteins of breast cancer cells
SERRSCBI_11615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
UPF0182
Motif
Other DBs
NCBI-ProteinID:
AIM21923
LinkDB
All DBs
Position
complement(2497947..2499485)
Genome browser
AA seq
512 aa
AA seq
DB search
MLNLATLLEESARTWPERPAVIQDDIPLSYRALNEMANRVASLLVARGVQPGERVALACP
NRPEFPAIYYGILKSGAVVVPLNILLKSAEFDYYLADSAAVALFCFEGSSGLPLGEEALR
AAAKAEQCREVFIIGDRLPLEGERFSTAIAEQATEFASAATLESDTAVVLYTSGTTGRAK
GAELTHANLVLNALGSVRLFDGSETDPDRHLVTLPLFHTFGSTVQMNAGFSAAATLVLVE
RFDAAQAIALMQRHGITFFAGVPTMYWALLNALDEHTDIERLRSTLRMAVSGGASLPVQI
LEDFSRRFGVNILEGYGLSETSPVATFNHPHRVTKPGSIGQPIWGVEVRLLDVTGQPIDG
VDQVGEIAVRGYNIMKGYLNRPEATAEVLENGWFRTGDLARRDADGFYFIVDRAKDMIIR
GGFNVYPREIEEALIRHPAVSLVAVIGVEHPSLGEEIKAVVVLKETEEPIEEEALIAWSR
ERLAAFKYPRIVEFVDRLPMTSTGKVLKRCLR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatctggctaccttgcttgaagaaagtgcgcgcacctggccggaacggccggcg
gtgatacaggacgatataccgctcagctatcgggcgctgaatgaaatggccaaccgggtg
gcgagtttactggtcgcgcgcggcgtgcagcccggtgaacgggtggcgctggcctgcccc
aatcggccggagtttccggctatctattacggcattctcaaaagcggcgcggtggtggtg
ccgctcaatattctgcttaagagcgcagagttcgactattacctggcggactcggcggcg
gtggcgttgttttgcttcgaaggcagcagcggcctgccgttgggggaagaggcgctgcgg
gcggcggcgaaggcggagcaatgccgtgaggtgtttatcatcggcgatcggctgccgctc
gaaggcgaacgtttcagcacggcgatagccgaacaggccaccgagttcgcttcggccgcg
acgctcgaaagcgacacggcggtggtgctgtataccagcggcaccaccggccgggccaaa
ggggcggagttgacccacgccaacctggtgcttaacgcgctgggatcggtgcggctgttc
gacggctcggaaacggatcccgatcgccatctggtgacgttgccgctgttccacacgttt
ggttcgacggtgcagatgaatgccggattttccgccgccgccaccctggtgctggtcgaa
cgcttcgacgccgcgcaggccatcgcgctgatgcagcggcacggcattaccttttttgcc
ggcgtgccgaccatgtattgggcgttgttgaatgcgctggatgagcatacggatatcgag
cgcctgcgcagcacgctgcgtatggcggtgtccggcggggccagcctgccggtgcagatc
ctggaggatttctcgcgccgcttcggcgtcaacattctcgaagggtatgggctgtcggaa
accagcccggtcgccacctttaaccatccgcaccgcgtgaccaaacccggctccatcggc
caaccgatctggggcgtggaggttcgcttgctcgacgtcaccggacaaccgatcgacggt
gtcgatcaggtgggagagatcgcggtgcgcggctacaacatcatgaaaggctatctgaac
cgtcccgaggcgacggcggaagtgctggaaaacggctggttccgcaccggcgatctggcg
cgccgcgatgccgacggcttctatttcatcgtcgatcgggccaaggacatgatcattcgc
ggcgggttcaacgtctatccgcgcgagattgaagaggcgctgattcgccatccggcggtg
tcgttggtggcggtgatcggtgtcgagcatccttcgctgggtgaagagatcaaagcggtg
gtggtgttgaaagagacggaggagccgatcgaggaagaggcgctgatcgcctggagccgg
gagaggctggcggcgttcaagtatccgcgtatcgtcgagtttgtcgatcgcttgccgatg
accagtaccggtaaggtgttgaaacgctgtttgcgctga
DBGET
integrated database retrieval system
