Serratia sp. SCBI: SERRSCBI_18385
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Entry
SERRSCBI_18385 CDS
T03314
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sers03021
]
SERRSCBI_18385
Transcription machinery [BR:
sers03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SERRSCBI_18385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIM23249
LinkDB
All DBs
Position
complement(3922670..3923245)
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AA seq
191 aa
AA seq
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MSEQLTDQVLVERVQKGDQKSFNLLVVRYQHKVASLVSRYVPQGDVPDVVQESFIKAYRA
LESFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYESAGALKEISNPEN
LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttaacggatcaagttctggttgagcgggtccaaaagggcgaccagaaa
tcgtttaacctactggtagtgcgctatcagcataaggtggcgagtctcgtttcccgctat
gtgccgcagggcgatgtgcccgatgtggtgcaggagtcgtttatcaaggcctatcgcgca
ctggaatcgttccgtggcgacagcgctttttatacctggttgtatcgaatcgccgtgaac
acggcaaagaattatctggttgctcaggggcgccgtccgccatccagtgatgtggacgcc
aacgatgcggaaaattacgaaagtgcgggcgcactgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagagctgagacagatagttttccgtaccattgagtctctccctgag
gatcttcgcatggcgattaccctgcgggagttggatggtctaagctacgaagagatagcc
gccatcatggattgcccggtcggaaccgtacgttcgcgtattttccgcgcccgggaagct
atcgataataaagttcaaccgctgatccagcgttag
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