KEGG   Ornithinimicrobium pratense: FY030_10520
Entry
FY030_10520       CDS       T06221                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
serw  Ornithinimicrobium pratense
Brite
KEGG Orthology (KO) [BR:serw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:serw03400]
    FY030_10520
Enzymes [BR:serw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FY030_10520
    5.6.2.6  RNA 3'-5' helicase
     FY030_10520
DNA repair and recombination proteins [BR:serw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FY030_10520
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH DUF6406 AAA_25 HTH_24
Other DBs
NCBI-ProteinID: QFG69079
UniProt: A0A5J6V550
LinkDB
Position
2290108..2295048
AA seq 1646 aa
MRSGPPRVGGPWQAEPVTSHDPADVIGRFSPATRAWFDASFPGPTAAQVGAWEAISRGQH
TLVVAPTGSGKTLSAFLWAIDRIIATPRPAQDPRARCRVLYVSPLKALAVDVERNLRSPL
VGIRHAAARLGSPSPAVSVAVRSGDTPAVERRAFAKDGAEILITTPESLFLLLTSQARQA
LSGVESVIIDEVHAVAGTKRGTHLAVTLDRLDALLERPAQRIGLSATVRPVEEVARYLGG
GRPVTTVHPPSTKRWDLEVVVPVPDMADPGATERPEMPGASPARRRTAGDDPVTAGQDSA
EQAGAKQAGAEQAGAEDAGAEDAGAGDAWLTGPGPVLPDLGGDGEVTDAVWAPAPDPEER
VSIWPHVERRVAGLIEEHSSTLVFTNSRRVAERFTARLNEEWQEQREGGAAGDEAAGTPA
QVMGQAGTSRGAAPAMARAHHGSVSKEQRAVIEDALKTGALPAVVATSSLELGIDMGAVD
LVVQVASPPSVASGLQRVGRAGHQVGAVSHGVFFPTHRADLVQTAVVVERMRAGMIESLR
VPANPLDVLAQQVVAMVAMEDWAVDELFDVVRRSASYAALPRPLFEAVLDMLAGRYPGED
FADLRPRVVWDRVTNTLAARRGAQLLAVTSGGTIPDRGLYAVMLATGDGPGRRVGELDEE
MVYESRVGDVFTLGTTSWRIEDITHDQVLVTPAPGQIGRLPFWKGEAQGRPAELGAAVGA
FLRETAGHAQARDDVAVARLQERGLDAWAAQNLITYLTDQREATGHLPDDRTILVERFRD
EIGDWRVVVHSPWGTPVHAPWALCLAARLRERYGTDVQALAADDGIVLRLPDLGAWDEDD
TRADGPAGAQHLDAEIAALLTLDPEEVADLVTQEIGGSALFAARFRECAARALLLPRRNP
GRRQPLWQQRQRSAQLLEVAVRYPTFPVVLEAVRECVQDVYDVDALVGLMRRVATREVRV
VSVASSSPSPFARSLLMGYIAQFLYEGDSPLAERRAAALSLDPSLLGELLGRGEGAALRD
LLDPEVVARTHAELQRLTPERAARDAEEVLDLLRLLGTLSTPEILERTQEDHRPQVEAWL
GALDQSRRVIQVRVAGEPRWADAADAGRLRDALGAAIPVGVPAVFLEGVQDPLGDLVVRY
ARTHTPFTIPDLAARLGLGAAVVRDAVRRLVSSGRMVQGALVPHGTSSDDVCDAEVLRLL
RRRSLAALRQEVEPVTQQTYARFLPRWQSVGELRGADGLLRAVEQLAGARMPASAVETLV
LPSRVQGYSPGLLDELMTSGEVLWQGHGTLPGDDGWVSLHLTETAHLTMTPPQEPPAGVE
LLDLLQRTPGAAYFFRALADGLGSSDDTGLVGTLWDLVWAGRISADTFAPVRALLAGGRT
AHKVRRAPQRPGRWSRTSVALASRSSRPALPARSGPPTGVGRWSLLPPVEEDPTVRALAT
AEQLLDRYGVLTRGSVVAEGIPGGYAGVYRVLATAEEAGRVRRGYVVEGLGAAQFGTAGA
IDRLRALTGDLLQAGREPEVVLVAATDPANPYGAAVPWPEREDETTHRPGRKAGAMVVLV
DGALVLYLERGGRSALTFGVPEHLDPDETWGAVAQALVGAVRGQTLSALTIGKIDGVGAL
ASTDPLARALVDAGFHTAPQGLRLRR
NT seq 4941 nt   +upstreamnt  +downstreamnt
ctgcgctccggaccgccccgtgtcggtgggccgtggcaggctgagccggtgaccagccac
gaccctgccgacgtcatcggtcggttctccccggccacgcgggcctggttcgacgcctcg
ttcccggggcccaccgccgcccaggtgggggcatgggaggcgatcagccggggccagcac
accctggtcgtggccccgaccgggtcgggcaagacgttgtcggccttcctgtgggccatc
gaccgcatcatcgccaccccccggcccgcgcaggacccacgagcacgttgccgggtgctc
tacgtctcccccctcaaggcactggccgtcgacgtggagcgcaacctgcgctcccccctc
gtcggtatccggcacgcggcggcccgcctgggctcgccctcccccgccgtctcggtcgcc
gtccgatcgggggacaccccggcggtggagcgccgagcctttgccaaggacggcgccgag
atcctcatcaccactccggaatcactcttcctgctgctcacgtcccaggccaggcaggcg
ctcagcggcgtcgagtcggtcatcatcgacgaggtccacgccgtggcggggaccaagcgg
gggacgcacctggcggtgaccctggaccggctggacgcgctgctggagcgaccggcgcaa
cggatcgggctgtcggcgacggtgcggccggtcgaggaggtcgcccgctacctgggcggg
ggccgaccggtgaccacggtgcaccccccctcgaccaagaggtgggacctcgaggtcgtc
gtgcccgtgcccgacatggctgacccgggcgccaccgagcggccagagatgccgggcgcc
tccccggcccgccgccgcacggccggcgatgacccggtcactgccggccaggacagtgcc
gagcaggcgggtgccaagcaggcgggtgccgagcaggcgggtgccgaggatgcgggtgcc
gaggatgcgggtgccggggatgcgtggctgaccggtccagggccggtcctgcccgacctg
ggcggcgacggcgaggtcaccgacgccgtgtgggcccccgcgccggacccggaggagcgg
gtctcgatctggccccacgtggagcgtcgggtcgccgggctcatcgaggagcactcctcg
accctcgtcttcaccaactcccgccgggtggccgagcggttcaccgctcggctgaacgag
gagtggcaggagcagcgtgagggcggggccgcaggagatgaggcggccgggacgccggct
caggtgatgggccaggcgggcaccagccggggcgcagcgccggccatggcccgggcccac
cacggctcggtgagcaaggaacagcgggccgtcatcgaggacgccctcaagacgggtgcg
ctgccggccgtggtcgccaccagcagcctggagctcggcatcgacatgggcgcggtggac
ctcgtcgtgcaggtggccagccccccgagcgtcgcctcaggcctgcagcgggtcggccgc
gcaggtcaccaggtcggggcggtcagccatggggtgttcttccccacccaccgggccgat
ctcgtgcagaccgcggtcgtggtcgagcggatgcgcgcggggatgatcgagtccctccgg
gtgccggccaacccactggacgtcctcgcccagcaggtggtggcgatggtggcgatggag
gactgggcggtcgatgagctcttcgacgtggtgcgccgctcggcctcctacgcggccctg
ccccgccccctcttcgaggcggtcctggacatgctggccggacgctaccccggagaggac
ttcgccgacctgcgcccccgggtggtgtgggaccgggtcaccaacaccctcgcggcccgt
cgcggcgcccagctgctcgcggtcacctcgggcggcacgatccccgaccggggcctgtac
gccgtgatgctcgccacgggcgacggccccggccgccgcgtgggcgagctcgacgaggag
atggtctacgagtcgcgggtcggtgacgtcttcaccctgggcaccaccagctggcggatc
gaggacatcacccacgaccaggtgctggtcacgccggcaccaggacagatcggccggctt
ccgttctggaagggcgaggctcagggccggcccgcggagctgggtgccgcggtaggcgcc
ttcctgcgggagacggccgggcacgctcaggcacgggacgatgtcgcggtcgctcgactt
caggagcggggtctggacgcctgggcggcgcagaacctcatcacctacctgaccgaccag
cgtgaggcgaccggccacctgcccgatgaccggacgatcctggtggagcgcttccgcgac
gagatcggcgactggcgggtggtcgtccactccccgtggggcaccccggtgcacgcgccc
tgggcgttgtgcctggcggcccggctccgggagcgctacggcacggacgtgcaggccctg
gccgccgacgacgggatcgtgctgcgcctgccggacctgggcgcctgggacgaggacgac
acccgggcagacggtccggcaggggcccagcacctggacgcggagattgccgcgctgctc
accctcgacccggaggaggtcgccgacctggtgacccaggagatcggcggctcggcgctg
tttgccgcccgcttccgcgagtgcgcggccagggcgctgctcctgccccgccgcaacccc
ggccggcggcagccgttgtggcagcagcggcagcgttctgcgcagctgctggaggtcgcc
gtgcgctacccgacctttccggttgtgcttgaggcggtccgtgagtgcgtccaggacgtc
tatgacgtggacgctcttgtcggcctgatgcggcgggtggccacccgcgaggtccgggtg
gtctcggtcgccagctccagcccctccccgttcgcgcggtcactgctgatgggttacatc
gcccagttcctctacgaaggcgactccccgctggccgagcggcgggccgcagccctgtcc
ctggacccctcgttgctgggcgagctgctgggccggggcgagggcgcggcactgcgcgac
ctgctcgaccccgaggtggtggcacgcacccacgccgagctgcagcggctgacccctgaa
cgtgccgcgcgggacgccgaggaggtgctggacctgctgcggctgctggggacgttgtcg
accccggagatcctcgagcgcacccaggaggaccaccgcccccaggtcgaggcctggctg
ggtgccctcgaccagtcccgacgagtgatccaggtgcgggtcgcgggcgagccacgctgg
gccgacgctgcggacgcgggccggctgcgcgacgcactgggcgcggccataccggtcggg
gtgccggcggtcttcctcgagggggtgcaggacccgctcggtgacctggtggtccgctac
gcccgcacccacaccccgttcaccatccccgacctggctgcccggctcggcctcggcgcg
gcagtggtgcgcgatgccgtgcgccgcctggtctcctcgggccgcatggtgcagggcgct
ctggtgccgcacggcaccagcagcgacgacgtctgcgacgccgaggtcctgcgcctgctg
cgtcgccgctcgctggcggcgctgcgccaggaggtcgagccggtcacccagcagacctac
gcccgcttcctgccccgctggcagtcggtcggcgagctgcgcggggccgacggcctgctg
cgggcggtggagcagctggccggtgcccgaatgccggcctcggcggtcgagaccctggtg
ctgccgtcccgggtgcagggctactcccctggcctgctcgacgagctgatgacctccggt
gaggtgctctggcagggccacggcacgctgccgggtgacgacggctgggtctcgctgcac
ctaaccgagaccgcgcacctgacgatgaccccgccgcaggagccaccggccggggtggag
ctgcttgatctgctgcagcggaccccgggcgccgcctacttcttccgcgcgctcgccgat
ggcctgggcagcagtgacgacaccggtctggtggggacattgtgggacctggtctgggcg
ggccggatcagcgctgacaccttcgccccggtccgggccctgctcgccggcgggcggacg
gcgcacaaggtgcggcgcgcgccccagcggcccggccgctggtcccgcacctccgtcgcc
ctggcctcccgctcctcccgcccggcgctgccggcccggtcgggaccaccgaccggggtg
ggtcgctggtcgctcctgccaccggtcgaggaggatccgacggtccgggcgctggccacc
gccgagcagctgctcgaccgctacggcgtcctgacgcgcggctcggtcgtcgccgaaggg
atcccgggcgggtatgccggggtgtaccgcgtgctggccacggccgaggaggccggtcgc
gtccgccgcgggtatgtggtggagggcctgggggcggcgcagttcggcacagcaggggcc
attgaccgcctccgggccctgaccggggacctgctgcaggccgggcgcgagccggaggtg
gtgctggtggccgccactgacccggccaacccctatggcgcggccgtgccgtggccagag
cgcgaggacgagaccacgcaccggcccgggcgcaaggccggtgcgatggtggtgctggtg
gacggcgccctcgtgctctatctcgagcggggcgggcgcagcgcgctgaccttcggcgtc
cccgagcacctggaccccgacgagacctggggcgccgtcgcccaggccctcgtcggcgcc
gtccgcgggcagaccctcagcgctttgacgatcggcaagatcgacggggtgggggccctc
gcctccaccgatcccctggcccgggccctggtcgacgccggcttccacaccgcaccccag
gggctgcgcctgcgccggtga

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