Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_18610
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Entry
CFSAN001921_18610 CDS
T02737
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc02024
Quorum sensing
setc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFSAN001921_18610 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFSAN001921_18610 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setc03019
]
CFSAN001921_18610 (hfq)
03036 Chromosome and associated proteins [BR:
setc03036
]
CFSAN001921_18610 (hfq)
Messenger RNA biogenesis [BR:
setc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFSAN001921_18610 (hfq)
Chromosome and associated proteins [BR:
setc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CFSAN001921_18610 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AGQ69371
LinkDB
All DBs
Position
complement(3823486..3823794)
Genome browser
AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGASNNYHHGSNAQGSTAQQDSEETE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcattgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggtcaaatcgagtcctttgat
cagttcgtgatcctgttgaagaacacggtcagccagatggtttataagcacgcgatttct
actgttgtcccgtctcgcccggtttcccatcacagcaacaatgccggtggcggcgccagc
aataactaccatcacggtagcaacgcgcaggggtctactgcgcaacaggacagcgaagag
actgaataa
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integrated database retrieval system
