KEGG   Streptococcus equi subsp. zooepidemicus ATCC 35246: SeseC_01052
Entry
SeseC_01052       CDS       T02355                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sezo  Streptococcus equi subsp. zooepidemicus ATCC 35246
Pathway
sezo03030  DNA replication
sezo03410  Base excision repair
sezo03420  Nucleotide excision repair
sezo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sezo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SeseC_01052 (ligA)
   03410 Base excision repair
    SeseC_01052 (ligA)
   03420 Nucleotide excision repair
    SeseC_01052 (ligA)
   03430 Mismatch repair
    SeseC_01052 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sezo03032]
    SeseC_01052 (ligA)
   03400 DNA repair and recombination proteins [BR:sezo03400]
    SeseC_01052 (ligA)
Enzymes [BR:sezo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SeseC_01052 (ligA)
DNA replication proteins [BR:sezo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SeseC_01052 (ligA)
DNA repair and recombination proteins [BR:sezo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SeseC_01052 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SeseC_01052 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     SeseC_01052 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SeseC_01052 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT 5_3_exonuc RTT107_BRCT_5
Other DBs
NCBI-ProteinID: AEJ25075
LinkDB
Position
872143..874101
AA seq 652 aa
MKKRIRELTDLLNQYRQEYYTNDAPSVSDSEYDKLYRELVELEKAYPAYVLKDSPTQLVG
GTILTGFQKYQHQYPLFSLQDAFSREELNAFDQRIKSAFPEAEYLAELKIDGLSISLVYE
AGILKVGATRGDGTVGENITENIKNIEDIPKRLDQALDVTIRGEAYMSRKAFKTINEERQ
ENGEPEFANPRNAAAGTLRQLDTRIVAKRQLATFLYQEVGLEAADSQQKTLERLADLGFS
VNSHYLLSSSMNDIWDFIQNIEATREELPYEIDGVVVKVNQLAIQEELGFTVKAPRWAIA
YKFPAEEKEAEIVSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVVVYKAGDIIPAVLRVVEAKRSNQTPMPIPTACPSCQSQLVHFEDEVALRCINPLCPS
LVQRSLEHFASRQAMNIAGLGPAVVEKLYSAGLVHDVADIYQLALEDLLTLDGIKEKSAE
KLLSAIEQSKANSAEKLLFGLGIRHIGAKASRLILETYGDLETLLSVTAEELAQIAGLGL
VIGQSLVQYFQQDQAAQLLAELKSAGVNLAYLGQRPDRQAELFGLTVVLTGKLEKLNRTQ
AKEKLEQLGAKVTGSVSKKTDLVVAGSEAGSKLVKAQQLGIRIEDEDWLLNL
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgaaaaaacgaataagagaattgactgatctgttaaatcaataccgtcaggagtattac
accaatgacgctccttctgtatctgatagtgagtatgataagctttatcgtgagcttgta
gagttggagaaggcttatccagcctatgtcctaaaggacagccccacacagctggtgggc
ggtacgattttgacaggctttcagaaatatcagcaccagtatccgctctttagtttgcag
gatgctttttcacgtgaagagcttaacgcctttgatcagcggatcaaatcagcctttcct
gaggctgaataccttgctgagctaaaaattgatggcttatccatttcattggtttatgag
gctggtattttaaaagttggagcgacgcgtggtgatgggactgttggtgagaatatcact
gaaaacatcaagaacattgaggatattcccaaacggctagatcaagcacttgatgtgacg
atacgaggagaggcctatatgtcgcgcaaggcctttaagacgatcaatgaagagcgtcag
gaaaatggtgagccagaatttgccaatccaagaaatgcagcggcaggaacgttgcggcag
ctagatactaggattgttgccaagcggcagctagcgacctttttgtatcaggaggtaggc
ttagaggctgctgatagccagcaaaagaccttggagcgcttggccgatttaggcttttcg
gtcaatagccactatctgctgtcctcatcgatgaatgacatttgggactttatccagaac
attgaagccactagagaagagctaccttatgagattgatggtgtggtggtcaaggttaat
cagttggcgatccaagaggagcttggctttaccgtcaaggcaccacgctgggctattgct
tataagtttccagcagaagaaaaggaagctgagattgtatctgtggattggacggttggc
cgaacaggtgtggtcacaccaacagctaatttgacccctgtgcagctggcaggcaccact
gtcagtcgagcgaccttgcataatgttgattatattgcagaaaaggatattcgcattggg
gatacggtggtggtgtataaggctggagatattattccggctgttttacgagtggttgag
gcaaagcgcagcaatcagactccaatgcctattcctacagcctgtccttcttgtcagagt
cagctggtgcattttgaggacgaggtggctttgcgttgcattaaccccttgtgtccgagc
ttggttcaacggagcttggagcattttgccagtcgtcaggcgatgaatatcgctggtctt
ggtccagcggttgttgaaaagctttattctgctggcctggtgcatgatgtcgctgatatt
taccagctagctctagaggatttgctgaccctagatggcattaaggaaaaatcagctgaa
aagctcttgtctgctattgagcaatcaaaggctaattcggctgaaaagctcttgtttggg
cttggtattcgtcacattggagcaaaagccagtcgcttgatattagaaacctatggtgat
ttggagaccttgttaagcgtgactgctgaggagctagcgcaaattgctggacttggtctt
gtcatcgggcaatcgctggtgcagtatttccagcaggatcaagcagctcagctcttagct
gaattaaagtcggcaggtgttaatctagcttatttgggccaaagacctgatcggcaggct
gagctttttggactcacagtagtattgacaggaaaattagaaaagctcaaccgtacccaa
gccaaggaaaagctagagcagcttggtgctaaggtaacaggaagcgtttctaaaaaaaca
gatttagttgttgctggtagcgaggcaggctctaagctggtcaaggcccagcagctgggc
atcagaattgaagatgaggattggttgctcaatctttag

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