Streptomyces pratensis: Sfla_3433
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Entry
Sfla_3433 CDS
T01647
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfa
Streptomyces pratensis
Brite
KEGG Orthology (KO) [BR:
sfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfa03032
]
Sfla_3433
03400 DNA repair and recombination proteins [BR:
sfa03400
]
Sfla_3433
Enzymes [BR:
sfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sfla_3433
DNA replication proteins [BR:
sfa03032
]
Prokaryotic type
DNA Topoisomerases
Sfla_3433
DNA repair and recombination proteins [BR:
sfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sfla_3433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADW04854
UniProt:
A0A8D4BGC2
LinkDB
All DBs
Position
3964339..3967206
Genome browser
AA seq
955 aa
AA seq
DB search
MSPTSETAGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDEYTGEVR
RLGVDVENDFQPIYVVNADKKAQVRKLKQLLAESDELFLATDEDREGEAIAWHLQEVLRP
KVPVHRMVFHEITKDAIRAAVANPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRTGDASDPSTLTARLSAVDGR
RIAQGRDFGPDGQLKQGSAQTLHLDETNARALAAALADSTFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVSAARAQVTQLYGA
NYLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMK
DATGNSVTVKIGGRASDGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQV
AEGDALTADEVTVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQSVPWLRRFYFGADD
DTAGAGKASDAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGNDIKLRVGRYGPYIERG
EKDSEGHQRADVPEDLAPDELSVELAEELLAKPSGDFELGADPVSGNQIIAKDGRYGPYV
TEVLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGEDAEGVEITAQN
GRYGPYLKKGTDSRSLTSEEQLFDITLDEALAIYAQPKQRGRAAAKPPLKELGTDPVSGA
PVVVKDGRFGAYVTDGETNATLRTDDSVEAITPERGYELLAEKRAKGPAKKKTAKKAPAK
KATAKKATTAKKATAKKTAATKTTAAKKTTTAKKAPAKKATAAAKKTATASSDEG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgaaaccgcaggccgccgactcgtcattgtcgagtcgcctgccaag
gcgaagacgatcaagggctacctcggccccggatacgtcgtcgaggcgagcgtcgggcac
atccgcgacctgccgaacggcgccgctgaggtgccggacgagtacacgggtgaggtacgc
cgcctcggtgtggacgtcgaaaacgacttccagccgatctacgtcgtcaacgcagacaag
aaggcccaggtcaggaagctcaagcagctcctcgccgaatccgacgaactcttcctcgcc
accgatgaggaccgcgagggcgaagccatcgcttggcacctccaggaagtcctgcggccc
aaggtcccggtccaccggatggtcttccacgagatcaccaaggacgcgatccgcgccgcc
gtcgccaacccgcgcgagctcaaccagcgcatggtcgacgcccaggagacccgccgcatc
ctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatgccgcgg
ctgtccgcgggccgggtgcagtccgtcgccacccgtctcgtggtcgagcgggagcgcgaa
cgcatcgccttccgttccgccgagtactgggacctgaccggcaccttcgccaccggccgc
accggtgacgcctccgacccctcgacgctcaccgcccgcctcagcgcggtcgacgggcgc
cgtatcgcccagggccgcgacttcggccccgacggacagctcaaacagggctccgcccag
acgctgcacctggacgagacgaacgcccgcgccctggccgcggcgctcgccgactccacg
ttcgcggtccgctccgtcgagtcgaagccgtaccgccgctcgccgtacgcgcccttccgc
acgacgaccctccagcaggaggcgagccggaagctgggcttcggggccaaggcgacgatg
caggtggcgcagaagctgtacgagaacggcttcatcacctacatgcgtacggactccacg
accctctcggacaccgcggtctccgcggcccgggcgcaggtcacgcagctgtacggggcg
aactacctgcccgacaagccgcgcacgtacgccggcaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctccggcgaccgcttccgcacccccgcggagaccggtctcacc
ggtgaccagttccggctctacgaactgatctggaagcggaccgtcgcctcccagatgaag
gacgccacgggtaactccgtcacggtgaagatcggtggccgggcgagcgacggccgggac
gccgagttctccgcgtccggcaagacgatcaccttccacggcttcatgaaggcgtacgtc
gaaggcgcggacgaccccaacgccgagctggacgaccgtgagcgccggctgccccaggtc
gccgagggcgacgcgctgaccgccgacgaggtcacggtcgacggtcacgcgacgaagcct
ccggcccgctacaccgaggcctcgctggtcaaggagctggaagagcgcgagatcggccgt
ccgtcgacgtacgcctcgatcatcgggaccatcctggaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtcgttcctctcgttcgccgtggtcaacctgctggagaagcac
ttcggccggctcgtcgactacgacttcaccgcccgcatggaggacgacctcgaccgcatc
gcgcggggtgaggcccagtccgtgccgtggctgcggcggttctacttcggcgcggacgac
gacacggccggggccggcaaggcctccgacgcgggcaacggcgacggtgaccacctcggt
ggtctgaaggagctggtgaccgacctgggcgcgatcgacgcccgcgagatctcctcgttc
cccgtcggtaacgacatcaagctccgtgtcggccggtacggcccgtacatcgagcggggc
gagaaggactccgagggccaccagcgcgccgacgtgccggaggacctggcgcccgacgag
ctgtccgtggaactcgcggaggaactgctggccaagccgagcggagacttcgaactcggc
gccgacccggtcagcggaaaccagatcatcgcgaaggacgggcgctacggtccgtacgtc
accgaggtgctgcccgagggcacgccgaagacgggcaagaacgcggtgaagccgcggacc
gcgtccctcttcaagtcgatgtcgctcgacacggtgacgctcgccgacgcgctcaagctg
atgtcgctgccgcgcgtggtcggcgaggacgccgaaggtgtcgagatcaccgcgcagaac
ggccgctacggcccgtacctgaagaagggcacggactcgcgttcgctgacgtccgaggag
cagctcttcgacatcacgctcgacgaggcgctcgcaatctacgcccagccgaagcagcgc
gggcgggccgccgccaagccgccgctgaaggaactgggcacggaccccgtgagcggcgcc
ccggtggtcgtcaaggacggccggttcggcgcgtacgtcaccgacggtgagaccaacgcg
acgctgcggaccgacgacagtgtcgaggccatcacgccggagcgcggctacgagctgctc
gccgagaagcgggccaaggggccggcgaagaagaagaccgccaagaaggctccggccaag
aaggccacggccaagaaggcgaccacggccaagaaggcgaccgccaagaagaccgcggcc
accaagacgacggccgccaagaagacgacgaccgccaagaaggcgcccgcgaagaaggcg
acggccgcagcgaagaagaccgccacggcttcctccgacgagggctga
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