Sinorhizobium fredii USDA 257: USDA257_c08450
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Entry
USDA257_c08450 CDS
T02188
Symbol
msbA1
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
USDA257_c08450 (msbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c08450 (msbA1)
Transporters [BR:
sfd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
USDA257_c08450 (msbA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_16
AAA
RsgA_GTPase
MMR_HSR1
AAA_21
Zeta_toxin
AAA_18
AAA_29
APS_kinase
DUF2231
AAA_30
AAA_28
AAA_33
AAA_25
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
AFL49437
UniProt:
I3X0N1
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All DBs
Position
886464..888413
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AA seq
649 aa
AA seq
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MESRAFGIAAILRSIGSRHVAPQKQKKTISADAANPVGTIANLWPYMWPAERPDLKLRVI
WATIILVAAKIVLVLVPYFFKWATDALNNKPDALGFLPQFLTGAVMLVLAYNLARLLQSG
LNQLRDALFARVGQHAVRQLAYRTFVHMHQLSLRFHLERRTGGLSRIIERGTKGIETIVR
FTILNSVPTLIEFLLTAVIFWWGYGFSYLLITAITVWLYIWFTVRASDWRIAIRRSMNDS
DTDANTKAIDSLLNFETVKYFGNEEMEAKRFDKSMERYERAATQVWTSLGWLNFGQALIF
GAGTAVMMTISALAVRSGEQTIGDFVFINAMLIQLAIPLNFIGFVYREIRQGLTDIENMF
DLLDVQAEVVDRPNAKELDIGRGAVAFKDVYFAYDPARPILKGISFEVPAGKTVAVVGPS
GAGKSTLSRLLYRFYDVQRGSITVDGQDVRGVTQKSLRAAIGMVPQDTVLFNDTIAYNIR
YGRVEASEFEVEAAAEAAQIADFIRGLPEGYRAMVGERGLKLSGGEKQRVAIARTILKAP
PILILDEATSALDTKTEQEIQAALDVVSRNRTTLVIAHRLSTVINADEIIVLKDGVIAER
GTHAELIDRDGLYASMWSRQREATQAEEQLKRVRERDDLGIVDRGAPAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtggagtcgcgtgcgttcggcatcgccgcgattctgagaagcattggaagcagacacgtg
gcaccccagaagcagaagaaaacgatttccgccgatgccgccaatccagtgggtacgatc
gccaatctctggccctatatgtggccggccgagcgtcccgatctcaagcttcgcgtcatt
tgggcgaccatcatccttgtcgccgccaaaattgtcctcgtcctggttccttatttcttc
aaatgggcgacggatgcgctgaacaacaagccggacgcgctcggcttcttgccgcaattc
ctgaccggagccgtcatgctggtgctcgcctacaatctggcgcgcctgctgcagtccggc
ctcaatcaattgcgcgatgccctttttgcgagggtcggccagcacgccgtgcggcagctt
gcctacaggaccttcgtccacatgcatcagctgtcgctgcgcttccacctggagcggcgc
acgggcgggctctcgcgcatcatcgagcggggcaccaagggcatcgagacgatcgttcgc
ttcacgatcctgaacagcgtcccgacattgatcgagtttctgctgacggcggtgatcttc
tggtggggctacggcttcagctatctcctcatcaccgctatcaccgtctggctgtacatc
tggttcaccgtacgcgccagcgactggcggatcgccattcgccgttcgatgaacgacagc
gacaccgatgcgaacaccaaggcaatcgattcgctgctcaacttcgagaccgtcaaatat
ttcggcaatgaagaaatggaggcgaagcgcttcgacaagtcgatggagcgctacgaacgc
gctgccactcaagtctggacctcgctcggctggctgaacttcggccaggcgctgatattc
ggggctggcacggccgtgatgatgacgatttcggcgctcgccgtgaggagcggcgagcag
accatcggcgacttcgtcttcatcaacgcgatgctgatccagcttgcgattccgctgaac
ttcatcggtttcgtctatcgcgagatccgtcaggggctgacggatatcgaaaatatgttt
gatcttctcgacgttcaggcggaggtggtcgaccggccgaatgcgaaggaactcgacatc
gggcgcggcgcggtcgccttcaaggacgtgtatttcgcctatgatccagcccgtccgatt
ctcaagggaatttccttcgaggtgcccgccggcaagacggtcgcagttgtcggcccgtcc
ggcgccggaaagtccaccctgtcgcggctgctctaccgcttctacgacgttcagcgggga
tcgatcacggtcgacggtcaggacgtgcgcggcgttactcagaagagtctccgcgccgcg
atcggcatggtcccccaggacacggtgctcttcaacgacacgatcgcctacaacatccgc
tacggccgcgtcgaagcctcggaatttgaggtcgaggcggccgcggaagccgcacagatc
gccgacttcatccgcggcctgccggagggttatcgagcgatggtcggcgagcgagggttg
aagctctcgggcggcgagaaacagcgcgttgcgatagcacgtacgattcttaaggcaccg
ccgatccttatcctcgacgaggcgacctccgcgctcgacacgaagacggagcaggaaatc
caggcggccctcgacgtcgtgtcgcgcaaccgcaccacgctcgtgatcgcgcatcgtctg
tcgaccgtcatcaacgccgatgagatcatcgttctcaaggacggcgtcattgccgagcgc
ggcacgcatgccgaattgatcgaccgtgatggcctctacgcctccatgtggagccgtcag
cgcgaggcaacacaagcggaggagcaattgaagcgggtgcgcgagcgcgacgatctcggt
atcgtcgaccgcggcgctccagcagcgtga
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