Sinorhizobium fredii USDA 257: USDA257_c35550
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Entry
USDA257_c35550 CDS
T02188
Symbol
valS
Name
(GenBank) valine--tRNA ligase ValS
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c35550 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c35550 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c35550 (valS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
USDA257_c35550 (valS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
USDA257_c35550 (valS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c35550 (valS)
Prokaryotic type
USDA257_c35550 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Herpes_ICP4_N
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AFL52114
UniProt:
I3X8A8
LinkDB
All DBs
Position
3717911..3720754
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AA seq
947 aa
AA seq
DB search
MLDKTYDSASVDPRISKTWDDENAFRAGAGAKPDAETFCIVIPPPNVTGSLHMGHALNNT
LQDVMVRFERMRGKDVLWQPGMDHAGIATQMVVERQLAQRKLPGRHEMGREAFIEKVWEW
KAESGGLIFNQLKRLGASCDWSRERFTMDEGLSEAVIEVFVSLYKEGLIYRDTRLVNWDP
KLQTAISDIEVEQVEVNGHLWHLRYPLEEGVTYQHPVAFDEDGNATEWETRDYLVVATTR
PETMLGDTGVAVHPDDPRYKGIVGKHVILPIVGRRIPIVADEYPDPTTGTGAVKMTPAHD
FNDFDVGKRRGLRQVSVLTPDGRISIKNNEDFLEGLDHPAALHGAWDQIEGKDRFEARGL
IVEILEAAGLVDHIEPHKHTVPHGDRGGVPIEPRLTEQWYVDAKTLAKPAIASVREGRTA
FVPNNWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKTEEEALHAAIQHYL
AHEGPMKAYVEDLLENFKPGEILTRDEDVLDTWFSSALWPFSTLGWPKETPELEKYYETD
VLVTGFDIIFFWVARMMMMGLHFMKDADGTPVEPFHTVYVHALVRDKNGQKMSKSKGNVI
DPLELIDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGTKLWNATRFAEMNGATSS
DGFIPEAASLTVNRWILTELSRTIRDVTEAIEGYRFNDAAGSLYRFIWNQFCDWYLELLK
PVFGGEDEAAKRESQACVAYVLDETYKLLHPFMPFMTEELWEKTAGPGRDRATLLCHAEW
PGAFYADDLAADEINWLIDLVSGIRSVRAEMNVPPAAMAPLVIVGAKGLTGERLDRHASA
IKRLARVESIEHAAAAPRGSAQIVIGEATACLPLGSLIDLTAEKSRLEKAIAKVEVERER
ILGKLANEKFVANAKPELVEAERERLAELTLQKDSLGVALSRVSEAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataagacctacgattccgcatccgtcgatccgcgtatttccaagacgtgggac
gatgaaaacgcgtttcgtgccggcgccggcgcaaagccggatgccgagaccttctgcatc
gtgattccgccgccgaatgttaccggctccctgcacatgggccatgcgctcaacaacacg
ctgcaggatgtcatggtgcgcttcgaacgcatgcgcgggaaggatgtgctctggcagccg
ggcatggaccatgccggcattgccacgcagatggtcgtcgagcggcagctcgcacagcgc
aagctgccggggcgccacgagatgggacgcgaggccttcatcgagaaggtctgggaatgg
aaggccgaatccggggggctgatcttcaatcagttgaagcggctcggcgcctcctgcgac
tggtcgcgcgagcgcttcaccatggacgaggggctgtccgaagcggtcatcgaggtcttc
gtcagcctttacaaggaagggctgatctaccgcgacacccgtctggtcaactgggatccg
aagctgcagacggcaatctcggacatcgaggtcgagcaggtcgaggtcaacggccatctc
tggcatctgcgctatccgctcgaagagggcgtcacctatcagcatccggtcgccttcgac
gaagacggcaacgccaccgagtgggaaacccgcgactacctggtcgttgccaccacgcgc
ccggaaacgatgcttggcgacacgggtgtagcggtgcatccggacgacccgcgctacaag
gggatcgtcggcaagcacgtcatcctgccgatcgtcgggcgccgcataccgatcgtcgcc
gatgaatatccggacccgacgactgggaccggtgcggtgaagatgacgccggcacacgac
ttcaacgatttcgacgtcggcaagcgcagggggcttcgtcaggtcagcgtgctgacgccc
gacggacggatctcgatcaagaacaatgaggacttcctcgagggcttggatcacccggca
gcgctccacggtgcctgggaccagatcgagggcaaggacaggttcgaggcgcgcgggctg
attgtcgagattctcgaggccgcgggtctcgtcgaccatatagagccgcacaagcacacg
gtgccgcacggtgatcgcggcggcgtgccgatcgagcctcgcctgaccgagcagtggtat
gtcgacgcaaagacgctggccaagccagccattgcctctgtcagggaagggcggacggcc
ttcgttcccaacaattgggaaaagacctacttcgaatggatggagaatatccagccctgg
tgtatttcgcgtcagctctggtggggtcaccagatccccgcctggtacggaccggacggt
caggtcttcgtcgagaagacggaggaagaggcgctgcacgcggcgattcagcattacctg
gcgcatgaagggccgatgaaggcctatgtcgaggacctgctcgagaacttcaagccgggt
gaaatcctgacgcgcgacgaggatgtgctggacacctggttctcgtccgccctctggccc
ttttcgacgctcggctggccgaaggagacgccggagctcgaaaaatactacgagaccgat
gtgctggttaccggtttcgacatcatcttcttctgggtcgcccggatgatgatgatgggc
ctgcacttcatgaaggacgccgatggaacgccggtcgagccgttccacaccgtctacgtc
catgcgctcgttcgcgacaagaacgggcagaagatgtcgaagtcgaagggcaacgtcatc
gatccgctcgaactgatcgacgaatacggtgccgacgcgctgcgtttcacactggcgatc
atggcggcccagggccgcgacgtgaagctcgatcccgcccgcatcgccggttaccgcaac
ttcggcaccaagctctggaacgccacgcgctttgccgagatgaacggcgccacgagcagc
gacggcttcattccggaagccgcctcgctgacggtgaaccgttggatcctgaccgagctg
tcgcgcacgatccgcgacgtcacggaagcgatcgagggatatcggttcaacgacgcggcc
ggaagtctctaccgcttcatatggaaccagttctgcgactggtacctcgaactgttgaag
cctgtcttcggcggcgaggacgaggccgccaagcgcgaatcgcaggcctgcgtcgcctac
gttctggatgaaacctacaagctgctgcatcccttcatgcccttcatgaccgaggagctt
tgggaaaagaccgccggtccgggacgcgatcgggcgacgcttctgtgccacgccgaatgg
ccgggggccttttacgcggatgatctggccgcggacgagatcaactggctgatcgatctc
gtctccgggattcgctcggtgcgggcggaaatgaacgttccgcccgcggcaatggcgccg
ctggtgatcgtcggcgccaagggcttgacgggcgagcggctcgatcggcatgcctccgcg
atcaagcggctggcaagggtggagagcatcgagcacgcggcggcggcgccgcgcggcagc
gcccagatcgtcataggcgaggcgacggcatgccttccgctcggcagcctcatcgatctc
acagccgaaaaatctcgcctcgagaaggcaatcgccaaggtcgaggtcgagcgcgagaga
attctcggcaaacttgccaacgaaaaattcgtcgcgaacgcaaaacccgaactggtcgaa
gcggaacgggagcgattggcagaactcaccctgcagaaggactcgcttggagtcgctcta
agccgcgtctcggaagcaggttag
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