Sinorhizobium fredii USDA 257: USDA257_c37960
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Entry
USDA257_c37960 CDS
T02188
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase TyrS
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c37960 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c37960 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c37960 (tyrS)
03029 Mitochondrial biogenesis [BR:
sfd03029
]
USDA257_c37960 (tyrS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
USDA257_c37960 (tyrS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class I (A)
USDA257_c37960 (tyrS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c37960 (tyrS)
Prokaryotic type
USDA257_c37960 (tyrS)
Mitochondrial biogenesis [BR:
sfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
USDA257_c37960 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
AFL52342
UniProt:
I3X8Y6
LinkDB
All DBs
Position
complement(3958480..3959733)
Genome browser
AA seq
417 aa
AA seq
DB search
MSEFKSDFLHTLKERGFIHTTSDDTGLDELFRKEIVTAYIGFDPTAPSLHAGGLIQIMML
HWLQATGHRPISLMGGGTGMVGDPSFKDEARQLMTSETIAANIASIKTVFSNYLRYGEGP
TDALMINNADWLLGINYLEFLRDVGRHFSVNRMLSFDSVKTRLDREQSLSFLEFNYMILQ
AYDFVELCKRTGCRLQMGGSDQWGNIVNGIDLGHRMGTPQLYALTSPLLTTASGAKMGKS
VNGAIWLNPDMLGSYDFWQYWRNTEDADVTRFLKLYTTLPMAEIERLSNLGGSEINEVKK
ILATEITAMLHGRAAAEQAAETARKTFEEGALAENLPSIDVSAHELESGLGLLTLLVRAG
LAGSNGEARRHVQGGGVRINDEQINDERRVVGSGDVTADGVFKLSLGKKKHILVRPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttcaagtccgatttcctccacactctcaaagaacgcggtttcatccatacc
acatcggatgataccggcctcgatgagctgttccgcaaggaaatcgtgactgcctatatc
ggattcgacccgacggcgccgagcctgcatgcgggcgggcttatccagatcatgatgctg
cactggcttcaggcgaccggccaccggcccatctcgctgatgggcggaggaaccggcatg
gttggcgatccgtccttcaaggatgaggcacggcagttgatgacgtcggaaacgatcgcc
gccaacatcgcgagcatcaagacggttttctcgaattatctgcgctatggcgaaggccct
accgacgcattgatgatcaacaacgccgattggttgctgggcatcaactacctcgagttc
ctgcgcgatgtcggccgccacttctccgtcaaccgcatgctttccttcgacagcgtcaag
acgcgcctcgaccgcgagcaatcgctgtcgttcctcgagttcaactacatgatcctacag
gcctacgactttgtggagctttgcaagcgcaccggatgccgcctgcagatgggcggctcg
gatcagtggggaaacatcgtcaacggcatcgatctcggccaccgcatgggaacgccgcaa
ctctatgcgctgacgtcaccgctgctgactacggcttccggcgccaagatgggcaagtcg
gtaaacggcgccatctggctcaacccggacatgctggggtcctatgatttctggcagtac
tggcgcaacaccgaggatgccgacgtcacgcgcttcctgaagctctatacgacgttgccg
atggcggaaatcgagcgcctgtccaacctcggcggctccgagatcaacgaggtgaaaaag
atcctggcgaccgaaatcactgcgatgctgcacggtcgggcagcagccgagcaggcggca
gaaacggcacgcaagacctttgaagaaggtgcgcttgcagaaaacctgccgtcgatcgac
gtttccgcccacgagctcgaatcgggcctgggcctactgacactgctggtccgtgccggc
ctcgccggatcgaacggcgaggctcgccgccacgtccagggcggcggcgttcgcatcaat
gacgagcagatcaatgatgagcgccgtgtcgtcggaagcggcgacgtcaccgccgatggc
gtcttcaagctgtcgctcggcaagaagaagcacatactggtgcggccggtctga
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