KEGG   Sinorhizobium fredii USDA 257: USDA257_c44970Help
Entry
USDA257_c44970    CDS       T02188                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase Ddl
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd00473  D-Alanine metabolism
sfd00550  Peptidoglycan biosynthesis
sfd01100  Metabolic pathways
sfd01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    USDA257_c44970 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    USDA257_c44970 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    USDA257_c44970 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfd01011]
    USDA257_c44970 (ddl)
Enzymes [BR:sfd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     USDA257_c44970 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:sfd01011]
 Precursor biosynthesis
  Amino acid ligase
   USDA257_c44970 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 CPSase_L_D2 GARS_A ATP-grasp
Motif
Other DBs
NCBI-ProteinID: AFL53035
UniProt: I3XAX9
LinkDB All DBs
Position
complement(4668532..4669458)
Genome map
AA seq 308 aa AA seqDB search
MSGRHLAVLMGGFSSERPVSLSSGAACADALEAEGYRVSRVDVGRDVAAVLADLRPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKAQAKHVAKAAGIPVADALIMDR
REFGNVHPMRPPYVVKPVREGSSFGVVIVKEDQSHPPQVITSSEWRYGDRVMVERYIAGR
ELTCGVMGDVALGVTEIIPQGHAFYDYDSKYVKGGSTHVIPARISPNIYQKIQSLAVKAH
QAIGCRGVSRSDFRFDDRGDGEGELIWLEINTQPGMTPTSLVPEMAQHAGLQFGEFLRWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagcggcaggcatcttgctgtcctgatgggcggattttcctcggagaggccggtgagc
ctgtcttccggggcggcttgtgcggatgccctggaggccgagggttaccgggtttcgcgc
gtcgatgtcgggcgtgacgttgccgccgtgctcgccgatttgcgtccggatgtcgtcttc
aatgccctgcatgggcccttcggcgaggacgggacaatccagggcatcctggaatatctc
gagattccctatacccactccggcgtccttgcctcggcgctagcgatggacaaggcgcag
gcgaaacatgtcgccaaggccgccggcattcccgttgccgacgctttgattatggaccgc
cgcgagttcgggaacgtccatcctatgcggccgccttatgtggtgaagccggtgcgggaa
gggtcgagcttcggcgtcgtcatcgtcaaggaagaccagtcgcatccgccccaggtcatc
acatccagcgaatggcgctacggcgaccgcgtgatggtcgagcgctacattgccggccgc
gaactcacctgcggcgtcatgggcgacgtggcactcggcgtcaccgaaatcattccgcag
gggcatgccttttacgactatgattccaaatatgtaaaaggtggttcaacacacgtcatt
ccggcgcggatttcaccaaatatttaccaaaaaatacaatccttagcggtgaaggcgcat
caggcgatcggttgccgcggcgtcagccgatcggacttccgtttcgatgatcgtggcgat
ggcgagggcgagttgatctggctggagatcaatacgcaacccggcatgaccccgacctcc
ctggtgccagaaatggcgcaacatgcgggccttcagtttggtgagtttctaaggtggatg
gtggaggacgcatcgtgcttgcgttga

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