Sinorhizobium fredii USDA 257: USDA257_c58510
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Entry
USDA257_c58510 CDS
T02188
Name
(GenBank) DNA polymerase III, delta subunit protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd03030
DNA replication
sfd03430
Mismatch repair
sfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USDA257_c58510
03430 Mismatch repair
USDA257_c58510
03440 Homologous recombination
USDA257_c58510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfd03032
]
USDA257_c58510
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c58510
Enzymes [BR:
sfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USDA257_c58510
DNA replication proteins [BR:
sfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
USDA257_c58510
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
USDA257_c58510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AFL54362
UniProt:
I3XEQ6
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All DBs
Position
6094008..6095042
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AA seq
344 aa
AA seq
DB search
MSEVKSHEFDSFLNRGASNYRLFLLYGPDRGLVSERAAQLAGRCGVALDDPFAVVKLDAT
ELQQGAGRVLDEVNAIGLFGGDKLVWIRGASSEKAIGEALQILADTPPPGSTLIIEAGDL
KKGAALRKIGESSRAVASIACYSDDARSLHALVDKELSEADLRISPAARERLLEALGGDR
MASRNEVRKLALYCRGKDMVDEEDVLAIVGDASAISVDDAVDAVLQGDVDALLHAMKKIT
TSKTPPFLVLQGCLRQFQQLDAMRAEMDTSRQSASQVVASLGRGLHFRRKPIVEAALKHW
TTPAIRRELGRLQATIYQSRARQSLEESMVLQNLLAIAIQSAKR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtcaaatcgcacgaattcgacagcttcctcaaccgaggcgcgtcgaactac
cgccttttcctgctctacggccccgaccgtggcctcgtttccgagcgtgccgcccagctt
gccggccgctgcggcgtcgctctcgatgacccctttgccgtcgtcaagcttgatgcaacg
gagttgcagcagggcgccggcagggtgctcgacgaagtcaatgccatcgggcttttcggc
ggcgataaactcgtctggatccgcggagcctcgagcgagaaggcgatcggcgaagccttg
cagattcttgccgacacgccaccgcccgggagcacgctgatcatcgaggcgggcgacctc
aagaagggcgcggcgctcaggaagattggcgaatcgtcgcgggccgtcgcctccatcgcc
tgctacagcgacgacgcccgcagcctgcatgctctcgtcgacaaggaactttcggaggcg
gatctgcgcataagcccggcggcacgcgagcgtctactcgaagcgctcggcggcgaccgc
atggcctcgcggaacgaggtgcggaagctcgcactctattgccgtggcaaggatatggtc
gacgaagaggacgtcctcgccattgtcggcgacgccagcgccatttccgtcgacgacgcg
gtggacgcggtgctgcagggcgacgtcgatgcactgctgcacgccatgaagaagatcacc
acctcgaaaacgccgcccttcctggtgctccagggctgcctcaggcagtttcagcaactg
gatgcgatgcgcgccgagatggacacaagccgccagtcggcgagccaggtggttgcaagc
ctcggccgcggccttcatttccgccgcaagccgattgtcgaggcggcgctcaagcactgg
accacgccggcgatccggcgtgaactgggacggctccaggcaacaatttaccagagccgc
gcgcgacagagcctggaagagagtatggtgctgcagaatctccttgcgatcgcgatacag
tcggcaaagcggtga
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