Sinorhizobium fredii HH103: SFHH103_00813
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Entry
SFHH103_00813 CDS
T01731
Symbol
dnaB
Name
(GenBank) dnaB
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SFHH103_00813 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfh03032
]
SFHH103_00813 (dnaB)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SFHH103_00813 (dnaB)
DNA replication proteins [BR:
sfh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SFHH103_00813 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
nSTAND3
AAA
NACHT
RuvB_N
SLFN-g3_helicase
AAA_24
TniB
AAA_22
AAA_16
IstB_IS21
AAA_5
NB-ARC
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CCE95312
UniProt:
G9A338
LinkDB
All DBs
Position
complement(893030..894529)
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AA seq
499 aa
AA seq
DB search
MNDAARKLAPLPKDQADQHYREAPNNLEAEQALLGAILVNNDAFYRVSDFLKPVHLYEPL
HRKIFEVAGEIIRMGKTANPVTVKTFLKADDKVGDLTVAQYLARLAAEAVSIINAEDYGR
AIYDLALRRSLITIGEDMVNIAFDAPLDMPPQSQIEDAERRLFELAETGRYDGGFQSFND
AVALAIDMAGQAFERDGHLSGISTGIHSLDGKMGGLQRSDLIILAGRPGMGKTSLATNIA
YNIAASYEPEVQPDGSFKARNGGVVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGDISE
ADFEKLVACSQMMQKVPLYIDQTGGISIAQLAARARRLKRQRGLDVLVVDYVQLMSGSKK
SGENRVQEITEITTGLKALGKELNVPIIALSQLSRAVESREDKRPQLSDLRESGSIEQDA
DVVLFVFREEYYVKNMEPRDELDPKYEEWKMQMERVKGTADVIIAKQRHGPTGTVKLAFQ
SEFTRFSDLADPSFTQYEH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcagcgcgaaagctcgctcccttgcccaaggatcaggcggaccagcattac
cgcgaagcgccgaacaacctggaagccgaacaggcgctgctcggcgccatcctcgtcaac
aacgacgccttctaccgcgtctccgacttcctgaagcccgtgcatctctacgagccgctg
caccgcaaaatcttcgaggtcgccggcgaaatcatccgcatgggcaagaccgccaacccg
gtcacggtcaagacctttctcaaggccgacgataaagtcggcgacctgacggttgcgcag
tacctcgcgcgtcttgccgcggaagccgtttcgatcatcaacgccgaagattacggccgg
gcgatctacgacctggcgctccgccgatcgctgatcaccatcggcgaggacatggtcaac
atcgcctttgacgcgccgctcgacatgccgccgcagagccagatcgaggacgccgaacgg
cgccttttcgagctcgccgaaaccggccgctacgacggcggctttcaatccttcaacgac
gccgtggcgcttgccatcgacatggccggacaggccttcgaacgcgacgggcacctttcc
ggcatctccaccggcattcattcgctcgacggcaagatgggcggcctgcagcgctcggat
ttgatcatcctcgccggccgtccgggcatgggcaagacctcgcttgccaccaatatcgcc
tacaacatcgccgcgtcatatgaaccggaagtgcagcccgacggctccttcaaggcgaga
aacggcggcgtcgtcggcttctattcgctcgaaatgtcgtccgagcagctcgccacccgt
atcatctcggagcagaccgaggtgtcgtcctcgaagatccgtcgcggcgatatctccgaa
gccgatttcgagaagctcgtcgcctgctcgcagatgatgcagaaggtgccgctctacatc
gaccaaaccggcggtatctcgattgcccagcttgcggcgcgcgcccgccgcctgaagcgt
cagcgcggcctcgacgtcctggtcgtcgactacgtccagctcatgtccggctcgaagaaa
tcgggcgaaaaccgcgtgcaggaaatcaccgagatcaccacggggctcaaggccctcggc
aaggaattgaacgtgccgatcatcgccctgtcgcagctgtcgcgcgccgtggaaagccgc
gaagacaagcggccgcagctttcggacctgcgcgaatcgggctcgatcgaacaggacgcc
gacgtggtgcttttcgtgttccgcgaggaatactatgtgaagaacatggagccccgcgac
gagctcgacccgaaatacgaagagtggaaaatgcagatggagcgggtgaagggcacggcc
gacgtgatcatcgccaagcagcgtcacggaccgaccggcaccgtgaaactcgccttccag
tcggaattcacccgcttctcggacctcgccgatccgtcgttcacccagtacgagcattga
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