Streptomyces ficellus: EIZ62_20460
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Entry
EIZ62_20460 CDS
T06929
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic00521
Streptomycin biosynthesis
sfic00523
Polyketide sugar unit biosynthesis
sfic00525
Acarbose and validamycin biosynthesis
sfic00541
O-Antigen nucleotide sugar biosynthesis
sfic01055
Biosynthesis of vancomycin group antibiotics
sfic01100
Metabolic pathways
sfic01110
Biosynthesis of secondary metabolites
sfic01250
Biosynthesis of nucleotide sugars
Module
sfic_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EIZ62_20460 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EIZ62_20460 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EIZ62_20460 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EIZ62_20460 (rfbB)
00525 Acarbose and validamycin biosynthesis
EIZ62_20460 (rfbB)
Enzymes [BR:
sfic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EIZ62_20460 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
QGV80340
UniProt:
A0A6I6F9G3
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Position
complement(4529930..4530919)
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AA seq
329 aa
AA seq
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MNTASRVLVTGGAGFIGSAYVRMLLGPDGPGHTQVTVLDKLTYAGNPANLDAVRDHPGFA
FVHGDVCDPALVDKLVSEHDQIVHFAAESHVDRSILAADAFVRTNVLGTQTLLEAAVRNG
VSRVVQISTDEVYGSIDTGSWTEEQPLRPNSPYAASKASADLIALAHHRTHGLDVRVTRC
SNNYGHHQFPEKVVPLFITRLLDGGRVPLYGDGSHVRDWLHVDDHVRAVELVRTRGRAGE
VYHVGGGTELSNRELTAALLDACGADWSRVDHVEDRKGHDRRYSVDWTKIRDELGYRPGR
DFATGLAETVAWYAEHRSWWQPLAARAAL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgcctcccgtgtcctggtgaccggcggagccggcttcatcggctcggcctac
gtccgcatgctgctgggccccgacggccccggccacacgcaggtcaccgtcctcgacaag
ctcacctacgcgggcaaccccgccaacctggacgccgtacgcgaccaccccggcttcgcg
ttcgtccacggcgacgtctgcgaccccgccctggtcgacaagctggtctccgagcacgac
cagatcgtccacttcgccgccgagtcgcacgtcgaccgctcgatcctcgccgccgacgcc
ttcgtccgcaccaatgtgctcggtacgcagacgctgctggaggcggccgtgcgcaacggc
gtctcccgcgtcgtccagatctccacggacgaggtgtacgggtcgatcgacacgggctcg
tggaccgaggagcagccgctgcggcccaactccccctacgccgccagcaaggcgtccgcc
gacctgatcgccctggcccaccaccgcacgcacggcctggacgtgcgggtgacgcgctgc
tccaacaactacggccaccaccagttccccgagaaggtcgtcccgctgttcatcacccgg
ctcctggacggcggccgggtgccgctgtacggggacggctcgcacgtccgggactggctg
cacgtcgacgaccacgtgcgggccgtggagctggtgcgcacccggggccgggccggcgag
gtctaccacgtcggcggcggtacggagctgtccaaccgggagctgaccgccgcgctgctc
gacgcctgcggcgcggactggtcgcgggtggaccacgtcgaggaccgcaagggccacgac
cggcgctactcggtggactggacgaagatccgcgacgagctgggctaccggccgggccgt
gacttcgcgaccgggctggccgagacggtcgcctggtacgcggagcaccgttcctggtgg
cagcccctggcggcccgggcggcgctgtga
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