Serratia ficaria: SAMEA4384070_2824
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Entry
SAMEA4384070_2824 CDS
T06444
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sfj
Serratia ficaria
Pathway
sfj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4384070_2824 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfj01007
]
SAMEA4384070_2824 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfj03016
]
SAMEA4384070_2824 (aspS)
03029 Mitochondrial biogenesis [BR:
sfj03029
]
SAMEA4384070_2824 (aspS)
Enzymes [BR:
sfj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SAMEA4384070_2824 (aspS)
Amino acid related enzymes [BR:
sfj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA4384070_2824 (aspS)
Transfer RNA biogenesis [BR:
sfj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMEA4384070_2824 (aspS)
Prokaryotic type
Other AARSs
SAMEA4384070_2824 (aspS)
Mitochondrial biogenesis [BR:
sfj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SAMEA4384070_2824 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
SNW02518
UniProt:
A0A240C5Y7
LinkDB
All DBs
Position
1:complement(2976668..2978452)
Genome browser
AA seq
594 aa
AA seq
DB search
MRTEYCGQLNLSHVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQKVAFDKA
YDLRNEFCIQIVGTVRARPDSQINKDMATGEVEVFAHALEIINRSEPLPLDSNQVNSEEA
RLKYRYLDLRRPEMADRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
AEQVREVMEKLARELWLDVKGVDLGNFPVMTFAEAMRRYGSDKPDLRNPLELVDVADLVK
DVEFKVFSGPANDAKGRVAAICVPGGAQLTRKLIDEYGAFVNIYGAKGLAWLKVNDRAAG
MDGVQSPIAKFLSAEVLEAILARTNAQTGDILFFGADSVKIVTDAMGALRLKLGRDLELT
QLDRWAPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMSPEQLAGTPTNAIANAYDMVING
YEVGGGSVRIHRSEMQQTVFSILGIDEHEQREKFGFLLDALKYGTPPHAGLAFGLDRLVM
LLTGTDNIRDVIAFPKTTAAACLMTDAPSFANPASLQELAISVVKKASAEQESE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgaatattgcgggcagttgaatctgtcccacgtaggccaggaagtcacactc
tgtggttgggtcaaccgtcgtcgcgatctcggcggcctgatctttattgatatgcgcgac
cgcgaaggcatcgtgcaggtgttcttcgatccggaccagaaagtggcgttcgacaaggcc
tatgacctgcgcaatgaattctgcatccagatcgtcggcaccgtgcgtgcgcgtccggac
agccagatcaataaagatatggccaccggcgaggtggaagtcttcgcgcatgcgctggag
atcatcaaccgctccgaaccgctgccgctggattccaaccaggtgaacagcgaagaagcg
cgtctgaaataccgctacctggacttgcgccgcccggaaatggccgatcgcctgaaaacc
cgcgccaagatcaccagcttcgtgcgccgctttatggacgaccacggcttcctcgacatc
gaaaccccgatgctgaccaaggccacgccggaaggcgcccgcgactatctggtgccgagc
cgcgtgcacaaaggcaagttctacgcgctgccgcagtccccgcagctgtttaagcagctg
ctgatgatgtcaggtttcgaccgttactatcagattgttaaatgcttccgcgacgaagac
ctgcgcgctgaccgccagccggaattcacccagatcgacgtcgagacctccttcatgacc
gccgaacaggtgcgtgaagtgatggaaaaactggcgcgtgaactgtggctggacgtgaag
ggcgtggatctgggcaacttcccggtgatgaccttcgcagaagccatgcgtcgttacgga
tccgacaagccggacctgcgcaacccgctggagctggtggacgtggccgacctggtgaaa
gacgtcgagttcaaggtgttctccggcccggctaacgacgccaagggccgcgtcgcggcg
atctgcgttccgggcggcgcacagctgacccgcaaactgatcgacgaatacggcgccttc
gtcaacatctacggcgccaaagggctggcatggctgaaggtcaacgatcgcgccgccggc
atggacggcgtgcaaagcccgatcgccaaattcctcagcgcggaagtgctggaagctatt
ctggcgcgcaccaacgcgcagaccggcgatatcctgttcttcggcgccgacagcgtcaag
attgtgaccgacgcgatgggcgcgctgcgtctgaagctgggccgcgacctcgagctgacc
cagctggaccgctgggcgccgctgtgggtggttgacttcccaatgtttgaagaagacggc
gagggcggcctggcggcgatgcaccatccgttcaccgcgccgcgcgacatgagcccggaa
cagctggccggcacgccgaccaacgccatcgccaacgcctacgacatggtgattaacggt
tacgaagtgggcggcggttcggtgcgtattcaccgcagcgaaatgcagcagacggtgttc
agcattctgggcatcgacgaacacgaacagcgcgagaagttcggcttcctgctggatgcg
ctgaagtacggcacgccgccgcacgccggcctggccttcggcctggatcgcctggtgatg
ctgctgaccggcaccgacaacatccgcgacgtgatagccttcccgaaaaccaccgccgcg
gcctgtttgatgaccgatgcgccgagcttcgccaacccggcgtcgctgcaggagctggcg
atcagcgtggtgaagaaagcctccgctgagcaagagagcgagtga
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