Streptomyces formicae: KY5_1959c
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Entry
KY5_1959c CDS
T05416
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03030
DNA replication
sfk03410
Base excision repair
sfk03420
Nucleotide excision repair
sfk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KY5_1959c
03410 Base excision repair
KY5_1959c
03420 Nucleotide excision repair
KY5_1959c
03440 Homologous recombination
KY5_1959c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfk03032
]
KY5_1959c
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_1959c
Enzymes [BR:
sfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KY5_1959c
DNA replication proteins [BR:
sfk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KY5_1959c
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KY5_1959c
NER (nucleotide excision repair)
GGR (global genome repair) factors
KY5_1959c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ATL26977
UniProt:
A0A291Q672
LinkDB
All DBs
Position
complement(2352885..2355626)
Genome browser
AA seq
913 aa
AA seq
DB search
MAEKAAKKKSETATKPSGEQRPRLLLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFA
SMLANTLRDEAPTHFAVAFDVSRKTWRSEEFPEYKANRSKTPDEFKGQVELIGEMLDAMH
AVRFAVDGFEADDVIATLATQAEAAGFEVLIVTGDRDSFQLITEHVTVLYPTKGVSELTR
FTPEKVEEKYGLTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERAE
EVKGKAGQNFRDHLDAVKLNRRLTEMVRDVELPKTVAELERAPYDRTTLAMVLDTLEIRN
PSLRERLLAVDPGAEEAEQTPAEPGVELDGKVLGTGELAPWLAEHGTAVLGVATVDTWQL
GAGSVTEVALAAAGGAAAWFDPAALDEADEKAFAAWIADAHKPKVLHNAKAVMRVFPEHG
WRVDGVSMDTALAAYLVKPGRRSFALDALSLEYLGRELAPASAAEGQLAFGTEEDDTAEA
ESLMAQARTVLDLGTAFGEKLQEVGASDLLTDIELPTSTLLARLERHGIAADRAHLEAME
QQFAGAVQQAVKEAHEAAGHEFNLGSPKQLQEVLFGELNLPKTKKTKTGYTTDADALAWL
AAQTENELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQ
NIPVRTDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLLEAFTSGEDLHTT
VASQVFGVDGSDVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIDAGEARALMDTYFERFG
GVRDYLRRAVDEARATGYTETMLGRRRYLPDLNSDNRQRREMAERMALNAPIQGTAADIV
KIAMLNVHRALTEAKLESRMLLQVHDEIVLEIAAGERAKVEELVRREMAGAVSLRAPLDV
SVGVGADWESAAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaaaagcagcgaagaagaagtccgagaccgcgacgaagccgagtggcgagcag
cgtccgcgcctgctcctcatggacgggcactccctggcgtaccgggcgttcttcgcgctg
cccgcggagaatttcacgacggcgacgggccagccgacgaacgcgatctacggcttcgcg
tcgatgctggcgaacacgctgcgcgacgaggcgcccacgcacttcgcggtggccttcgac
gtctcgcgcaagacgtggcgctccgaggagttccccgagtacaaggcgaaccgctccaag
accccggacgagttcaaggggcaggtcgagctgatcggcgagatgctcgacgcgatgcac
gcggtgcgcttcgcggtggacggcttcgaggcggacgacgtcatcgccacgctggccacg
caggcggaggcggcgggcttcgaggtgctgatcgtcaccggcgaccgggactccttccag
ctgatcaccgagcacgtgaccgtgctgtaccccaccaagggcgtctccgagctgacccgc
ttcaccccggagaaggtcgaggagaagtacgggctcacccccagccagtaccccgacttc
gcggcgctgcgcggcgacccgtcggacaacctgccgggcatccccggtgtcggcgagaag
accgccgcgaagtggatcaaccagttcggttcgttcgccgacctcgtggagcgcgccgaa
gaggtcaagggcaaggccgggcagaacttccgcgaccacctggacgcggtgaagctcaac
cgccgtctgaccgagatggtgcgcgacgtcgaactgcccaagacggtcgccgagttggag
cgcgctccgtacgaccgtacgacgctggcgatggtcctggacaccctggagatccgcaat
ccgtcgctgcgcgagcggctgctcgccgtcgacccgggcgccgaggaggccgagcagacc
ccggccgagccgggcgtggagctggacggcaaggtgctcggcacgggcgagctcgcaccc
tggctcgccgagcacggcacggcggtgctcggtgtcgccacggtcgacacctggcagctg
ggcgcgggctcggtgacggaggtggcgctggccgccgccgggggagcggccgcctggttc
gacccggccgcgcttgacgaggccgacgagaaggcgttcgcggcgtggatcgccgacgct
cacaagccgaaggtcctgcacaacgcgaaggccgtgatgcgggtcttccccgagcacggc
tggcgggtcgacggcgtctccatggacacggcgctcgccgcgtacctggtcaagccgggc
cgccgttccttcgccctggacgcgctctccctggagtacctgggccgtgagctggcgccc
gcgtccgccgccgaggggcagctcgccttcggtacggaggaggacgacacggccgaggcc
gagtcgctgatggcgcaggcccgcaccgtcctcgacctgggcaccgccttcggcgagaag
ctccaggaggtcggcgcgagcgacctgttgacggacatcgagctgccgacgtccacgctc
ctggcccgtctggagcggcacggcatcgccgccgaccgcgcccatctggaggcgatggag
cagcagttcgccggcgcggtgcagcaggccgtgaaggaggcgcacgaggccgcggggcac
gagttcaacctgggctcgcccaagcagctccaggaagtcctcttcggcgagctgaacctg
cccaagacgaagaagacgaagaccggttacaccacggacgccgacgcgttggcctggctc
gcggcccagaccgagaacgagcttccggtcatcatgctgcgccaccgcgagcaggcgaag
ctgcgcgtcaccgtcgagggcctgatcaagacgatcgccgcggacggccgcatccacacc
acgttcaaccagacggtcgcggcgacgggtcgtctctcctccaccgacccgaacctccag
aacatccccgtgcgtacggacgagggccgggcgatccgccgcggcttcgtggtcggcgag
ggcttcgagtccctcatgaccgcggactacagccagatcgagctgcgggtgatggcgcac
ctctccgaggacgagggcctcctcgaggcgttcacctccggcgaggacctgcacaccacg
gtggcctcgcaggtgttcggcgtggacggctccgacgtcgacgcggagatgcggcgcaag
atcaaggccatgtcgtacggcttggcgtacggcctctcggcgttcggtctctcccagcag
ttgaacatcgacgcgggtgaggcgcgtgcgctgatggacacgtacttcgagcggttcggc
ggggtgcgcgactatctgcgccgcgcggtcgacgaggcgcgtgccacgggctacacggag
acgatgctgggccgccgccggtatctgcccgacctcaacagcgacaaccgccagcgccgc
gagatggccgagcggatggcgctcaacgcgccgatccagggcacggcggcggacatcgtc
aagatcgcgatgctgaacgtgcatcgcgcgctgacggaggcgaagctcgagtcccggatg
ctgctccaggtccacgacgaaatcgtcctggagatcgccgccggggagcgcgcgaaggtc
gaggagctggtccgcagggagatggccggtgcggtgtcgctgcgggcgccgttggatgtg
tcggtgggggtcggggcggactgggagtctgcggcgcactag
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