Shigella flexneri 301 (serotype 2a): SF4109
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Entry
SF4109 CDS
T00097
Symbol
yjdB
Name
(RefSeq) metal dependent hydrolase
KO
K03760
lipid A ethanolaminephosphotransferase [EC:
2.7.8.43
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00540
Lipopolysaccharide biosynthesis
sfl01100
Metabolic pathways
sfl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SF4109 (yjdB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SF4109 (yjdB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
SF4109 (yjdB)
Enzymes [BR:
sfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.8 Transferases for other substituted phosphate groups
2.7.8.43 lipid A phosphoethanolamine transferase
SF4109 (yjdB)
Lipopolysaccharide biosynthesis proteins [BR:
sfl01005
]
Lipid A
SF4109 (yjdB)
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Gene cluster
GFIT
Motif
Pfam:
Sulfatase
EptA_B_N
Motif
Other DBs
NCBI-GeneID:
1027417
NCBI-ProteinID:
NP_709827
UniProt:
A0A0H2VXP0
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Position
4272936..4274609
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AA seq
557 aa
AA seq
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MRTLFDGNTVMLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLV
FLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILIGAAAQYFIMTYGIVIDRSMIANIID
TTPAESYALMTPQMLLTLGFSGVLAELIACWLKIKPATSRLRSVLFRGANILVSVLLILL
VAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQ
NEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMF
SDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQC
INGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQ
TCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGL
PYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETK
YYQAADDILQTCRRVSK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactttgttcgatggaaacaccgtgatgttgaagcgcctactaaaaagaccctct
ttgaatttactcgcctggctattgttggccgctttttatatctctatctgcctgaatatt
gccttttttaaacaggtgttgcaggcgctgccgctggattcgctgcataacgtactggtt
ttcttgtcgatgccggttgtcgctttcagcgtgattaatattgtcctgacactaagctct
ttcttatggcttaatcgaccactggcctgcctgtttattctgattggcgcggctgcacaa
tatttcataatgacttacggcatcgtcatcgaccgctcgatgattgccaatattattgat
accactccagcagaaagttatgcgctgatgacaccgcaaatgttattaacgctgggattc
agcggcgtgcttgctgagctgattgcctgctggctaaaaatcaaacctgccacctcgcgt
ctgcgcagtgttcttttccgtggagccaatattctggtttctgtactgctgattttgctg
gtcgccgcactgttttataaagactacgcctcgttgttccgcaataacaaagagctggtg
aaatccttaagcccctctaacagcattgttgccagctggtcatggtactcccatcagcga
ctggcaaatctgccgctggtgcgaattggtgaagacgcgcaccgcaacccgttaatgcag
aacgaaaaacgtaaaaatttgaccatcctgattgtcggcgaaacctcgcgggcggagaac
ttctccctcaacggctacccgcgtgaaactaacccgcggctggcgaaagataacgtggtc
tatttccctaataccgcatcttgcggcacggcaacggcagtttcagtaccgtgcatgttc
tcggatatgccgcgtgagcactacaaagaagagctggcacagcaccaggaaggcgtgctg
gatatcattcagcgagcgggcatcaacgtgctgtggaatgacaacgatggcggctgtaaa
ggtgcctgcgaccgcgtgcctcaccagaacgtcaccgcgctgaatctgcctgatcagtgc
atcaacggcgaatgctatgacgaagtgctgttccacgggctggaagagtacatcaataac
ctgcagggtgatggcgtgattgtcttacacaccatcggcagccacggtccgacctattac
aaccgctatccgccgcagttcaggaaatttaccccaacctgcgacaccaatgagatccag
acctgtaccaaagagcaactggtgaacacttacgacaacacgctggtttacgtcgactat
attgttgataaagcgattaatctgcttaaagaacatcaggataaatttaccaccagcctg
gtttatctttctgaccacggtgaatcgttaggtgaaaatggcatctatctgcacggtctg
ccttatgccatcgccccggatagccaaaaacaggtgccaatgctgctgtggctgtcggag
gattatcaaaagcggtatcaggttgaccagaactgcctgcaaaaacaggcgcaaacgcaa
cactattcacaagacaatttattctccacgctattgggattaactggcgttgagacgaag
tattaccaggccgcggatgatattctgcaaacttgcaggagagtgagtaaatga
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