KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00898Help
Entry
SPHFLASMR4Y_00898 CDS       T04949                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
sfla  Sphingorhabdus sp. SMR4y
Pathway
sfla00970  Aminoacyl-tRNA biosynthesis
sfla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SPHFLASMR4Y_00898 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sfla03029]
    SPHFLASMR4Y_00898 (gatB)
Enzymes [BR:sfla01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     SPHFLASMR4Y_00898 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     SPHFLASMR4Y_00898 (gatB)
Mitochondrial biogenesis [BR:sfla03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SPHFLASMR4Y_00898 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: ASK87675
UniProt: A0A220W4D3
LinkDB All DBs
Position
complement(931980..933476)
Genome map
AA seq 498 aa AA seqDB search
MVKMTESTYRIQGGTGEWEVVIGLEVHAQITSESKLFSGASTEFGAEPNTQVSLVDAAMP
GMLPTLNAECVRQAVRTGLAINAQINKYSRFDRKNYFYADLPQGYQISQLYHPIVGEGVI
QISLDEKDPDAHGKAIGVERIHIEQDAGKLMHDQHPTMSYVDLNRCGVALMEIVSKPDMT
SPKEAAAYVRKLRSILRYVGSCDGNMEQGSMRADVNVSVRKPGGELGTRTETKNVNSMRF
IQAVIEYEAQRQVDLIEDGGAVVQETRLFDPDRGETRSMRSKEDAHDYRYFPDPDLLPLE
LEDDFIFDCKASLPELPDEKRARYKNVLGLSAYNAAVLTAEHETALWFEELLDTTDEPEK
IASSAANWMTSELFGALNRMGLDIAESPVSPAQAAELLGLIADGTISGKIAKQVFEIMLE
SGDGATKIVEEQGLKQESDTGAIEKVIAEVMAANEDKVAQYRDGKDKLFGFFVGQTMKAM
QGKANPQVVNELLKKTLG
NT seq 1497 nt NT seq  +upstreamnt  +downstreamnt
gtggtaaaaatgaccgaatcaacatatcgtatccagggcggaaccggcgaatgggaggtc
gtgatcggcctcgaggtccacgcccagatcacctccgaatcgaagctcttttccggggct
tccaccgaatttggcgcggaaccgaacacgcaggtcagcctggttgacgcggccatgccc
ggcatgctgccgacgctcaacgccgaatgcgtccgtcaggcggtgcgcaccggtctcgcg
atcaatgcccagatcaacaaatattcgcgcttcgaccgcaagaattatttctacgccgat
ctgccgcagggttaccagatttcccagctctaccatccgatcgtgggtgagggcgtgatc
cagatttcgctcgatgaaaaagatcccgatgcccatggcaaggcgatcggtgtcgagcgc
atccatatcgagcaggacgccggcaagctgatgcacgaccagcatccgaccatgtcctat
gtcgaccttaaccgctgcggcgtcgcgctgatggaaatcgtctccaagccggacatgacc
tcgcccaaggaagcggcggcctatgtccgcaagctgcgttcgatcctgcgctatgtcgga
tcatgcgacggcaatatggaacagggctcgatgcgcgccgatgtcaacgtcagcgtgcgc
aagcccggcggcgaactcggcacccgaaccgagaccaagaatgtcaactcgatgcgcttc
atccaggcggtgatcgaatatgaagcccagcgtcaggtcgatctgatcgaggacggcggc
gctgttgtgcaggaaacccgtctgttcgatcccgatcgcggagagacgcgttcgatgcgg
tcgaaggaagatgcgcacgactatcgctacttccccgatcccgacctgctgccgctggaa
ctggaagatgatttcatcttcgactgcaaggcgagcctgccggaattgccggacgaaaag
cgcgcccgctacaagaatgttctgggcctgagcgcttacaacgccgcagtgctgaccgca
gagcatgaaaccgcgctttggttcgaggaattgctcgataccacagacgagccggaaaag
atcgccagcagcgccgccaactggatgacatcggaactgttcggcgcgctcaaccggatg
gggcttgatatcgccgaaagtccggtttctccggcacaggccgcagaattgctcggcctt
atcgccgacggcacgatttccggcaagatcgccaagcaggtgttcgagatcatgctcgaa
agcggcgatggcgctacaaaaatcgtcgaggaacagggcctcaagcaggaatccgacacc
ggagcgatcgagaaagtcatcgccgaagtgatggccgccaatgaggacaaggtcgcccaa
tatcgcgacggcaaggacaaattgttcggtttcttcgtcggccagacaatgaaagccatg
cagggcaaggccaatccgcaggtggtgaacgagcttctcaagaagacgctgggttga

DBGET integrated database retrieval system