Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02501
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Entry
SPHFLASMR4Y_02501 CDS
T04949
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00300
Lysine biosynthesis
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
sfla01230
Biosynthesis of amino acids
Module
sfla_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPHFLASMR4Y_02501 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfla01002
]
SPHFLASMR4Y_02501 (dapE)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SPHFLASMR4Y_02501 (dapE)
Peptidases and inhibitors [BR:
sfla01002
]
Metallo peptidases
Family M20
SPHFLASMR4Y_02501 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ASK89240
UniProt:
A0A220W8T1
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Position
complement(2552934..2554061)
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AA seq
375 aa
AA seq
DB search
MTAPTALELAKRLIARPSITPATGPVFDEMEAMLAPLGFDITRFIAGGPPDGPVENLFAI
RKGPAGSRHFAYAGHLDVVPPGQGWQTDPFVPEIRGDLLYGRGAVDMKGSIAAFVAALHG
VPEDLGTISLIITGDEEGPARFGTVALMDLMAERGITPDLCLVGEPTSVNRLGDMMKIGR
RGSVNMWVTVNGTQGHVAYPQNADNPITKLGKILSEIDSLQLDEGTDWFQPSNIEFTDLH
VGNPAHNVIPARAEGRLSIRFNDRHSGESLSAMVRDIVERHGGELKPVISGEPFLTPPGE
FSDIVSAAVREITGVEPELSTSGGTSDARFLAKIMPVVEFGLCNATMHKLDEAVAIEDLE
QLSRIFSLVVKQALR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccaacagcactcgaactggccaaaaggctgattgcccggcccagcatcacc
cccgctaccggtcctgtttttgatgaaatggaagcgatgcttgcaccgctgggattcgac
ataacccgcttcatcgcgggtggtccgccggacggtccggttgagaatctttttgccatt
cgcaaaggaccggcaggatcccgccactttgcctatgccgggcatcttgatgtcgtgcca
cccggtcagggctggcagaccgatcccttcgtaccggaaattcgcggcgaccttctatat
ggccgcggcgctgtcgacatgaaaggcagtatcgccgcctttgtcgctgcgctgcacggt
gtgccggaagatctcggaacaataagcctgatcatcaccggtgacgaagaaggtccagcc
cgcttcggcacggtggcactgatggacctgatggcagagcgtggcatcactcccgatctt
tgcctcgtcggtgaaccaacgtcggttaaccggctcggcgacatgatgaagatcgggcgg
cgcggctcggtcaatatgtgggtgacggtcaacggcacgcagggccatgtcgcctatccg
caaaacgccgacaatccgatcaccaagcttggcaagattctcagcgaaattgattcgctg
caactggacgaaggcacagactggttccagccgagcaatatcgagtttaccgacctgcac
gtcggcaatccggcgcacaatgtgatcccggcgagggcagagggccgcttgtcgatccgc
ttcaacgaccggcacagcggcgagagtctcagcgccatggtgcgggacatagtcgagcgt
catggtggcgaactgaaaccggttatttccggcgaaccctttctgacgccgccgggagaa
ttttccgatatcgtttccgcggccgttcgcgaaatcaccggtgtggaaccggaactgtcc
acctcgggcgggacttcggatgcacggtttcttgccaaaatcatgccggtggtcgaattc
ggtctgtgcaatgcgacgatgcacaagctcgacgaggcggttgcgattgaggatctggaa
cagctgtccagaattttctcgctggtcgtcaagcaggccttgcgctga
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