Scleropages formosus (Asian bonytongue): 108919234
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Entry
108919234 CDS
T04919
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108919234 (seh1l)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108919234 (seh1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919234 (seh1l)
04131 Membrane trafficking [BR:
sfm04131
]
108919234 (seh1l)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108919234 (seh1l)
Membrane trafficking [BR:
sfm04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
108919234 (seh1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
108919234
NCBI-ProteinID:
XP_018582610
UniProt:
A0A8C9QVY3
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All DBs
Position
23:16900578..16909054
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AA seq
417 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISSKLSCSCISWNPSSSRAHPP
MIAVGSDDSCVTYGGKVQIYEYNENTRKYAKAETLMTVTDPVHDLAFAPNLGRSFHVLAV
ATKDVRIFKLMPMRKETATSSGPTKFEVQIMAQFDHHNSQVWRVSWNITSTLLASSGDDG
CVRLWKANYMDNWKCTGILKGDGSPVIGSSGQPVALSAAGGSSALASQNALNGVMAGRYF
FPPLDPPWAGSRYAHLLPPPSLIEQTCESESSRSQQTLLRRRFSGPALHSLPEKEGV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggcgcggagcatcgcggccgatcacaaagatctcattcatgatgtttcctac
gatttccacggccggcgcatggcgacgtgttccagcgaccagagcgtcaaggtgtgggac
aaaagtgagagcggggagtggcattgcactgcgagctggaagacgcacagcggctccgtg
tggcgtgtgacatgggcccacccggagttcggccaggtgttggcctcgtgctcctttgac
cggacggctgcggtgtgggaggagattgtgggagagtccaacgacaagcagagaggccag
agccactggatcaaaaggactacgctagtggatagccggacatcagtgactgacgtgaag
ttcgcccccaagcacatgggcttgatgctgaccacgtgctcggccgacggcgtggtgcgg
atctacgaggcacccgatgtgatgaacctgagccagtggtccctgcagcacgagatctcg
agcaagctgagctgcagctgcatctcgtggaacccctccagctcccgcgcccatcctccc
atgattgcagtgggcagtgacgacagctgtgtgacatacggagggaaagttcaaatctac
gagtacaacgaaaacacgaggaagtacgcaaaagcagagacgctgatgaccgtcacagac
ccagtgcacgatctcgcctttgctccaaacctgggccgctccttccatgtgctcgcagta
gccaccaaagatgtccgcatcttcaaactcatgcctatgcggaaggagactgccacgtcc
tcaggacccacaaagtttgaggtgcaaatcatggcgcagtttgaccaccacaactcccag
gtgtggcgagtgagctggaacatcacgagcactttgctcgcctcttccggtgacgacggc
tgcgtgaggctttggaaagcgaactacatggacaattggaagtgcacgggcatcttgaag
ggtgatggcagtccagtcatcgggtcctctggtcagcctgttgccctgagtgctgcaggg
gggtcctcagccttggcctcccagaatgccctgaacggagtgatggctggaaggtatttc
tttccccctctggaccctccctgggctggttccagatacgcccacctcctgcctcctccc
tccctcatagagcaaacatgtgagtctgagtcctcaagatcgcagcagactctgctgcgc
aggcgcttcagtggcccagccctgcactccttgccagaaaaagaaggggtctga
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