KEGG   Scleropages formosus (Asian bonytongue): 108920118
Entry
108920118         CDS       T04919                                 

Gene name
polb
Definition
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108920118 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfm03400]
    108920118 (polb)
Enzymes [BR:sfm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108920118 (polb)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.-  
     108920118 (polb)
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108920118 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     108920118 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 HHH_3 HHH_2 NTP_transf_2 Cdd1
Other DBs
NCBI-GeneID: 108920118
NCBI-ProteinID: XP_018584158
LinkDB
Position
21
AA seq 335 aa
MSKRKAPQETLNEGITDFLIELANYEKNVNRAIHKYNAYRKAASVIAKYPEKIKSGAEAK
KLDGVGAKIAEKIDEYLATGKLRKLEKIRSDDTSSSISLLTRVTGIGPAAARKFVEEGVK
TLDDLRKVEHKLNHHQKIGLKYFEDFEKRIPRVEMEKMEALIHGELKLLDSEYIGTICGS
YRRGAASSGDIDILLTHPSFTSQSEKQPRLLHAVVDHLESVGFITDTLSKGDTKFMGVCQ
LDRGEEEEEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRP
LGVTGVAGEPLLVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagtaagagaaaggcgccgcaggaaacgttaaacgaaggaattacagacttcctaatc
gagttggccaactatgagaaaaacgtgaacagggccattcataagtacaacgcttacagg
aaagcagcttctgttattgccaagtacccagagaaaatcaaaagtggcgccgaagccaag
aaattggatggagtcggagcaaaaatagctgaaaaaattgacgagtacttggccacagga
aagctaagaaagttggaaaagatccggagcgatgacaccagcagctccatcagcttactt
accagggttacaggcataggaccagccgctgctcgcaaatttgtggaagagggtgtgaaa
actctggatgatttaaggaaggttgaacacaaactcaatcaccaccagaagattggactc
aagtactttgaggactttgaaaagagaattccacgtgttgaaatggagaagatggaggct
ctaattcatggggaattgaagctgctggactctgaatacattgggaccatctgtggaagc
taccggcgaggagctgcgtccagcggggatattgacatcctgttaactcacccaagcttc
acctcccagtctgagaaacagcccagactcttgcatgccgtagtggatcacctggagtca
gtcggcttcatcaccgatactctgtcaaaaggagacaccaagttcatgggtgtgtgtcag
ctggatcgtggtgaggaagaggaggaatatcctcaccgccgcattgacatcaggttaatt
cccaaggatcagtactactgtggtgtgctctacttcactgggagtgacatctttaacaag
aacatgagaactcacgctttggagaagggcttcactcttaatgaatacactatccgtccg
ctaggagtcactggtgtagcgggagagccgctcctcgtggacagtgagaaggacatcttc
gactacatccagtggaaatacagagaacccaaggatcgcagcgagtaa

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