Scleropages formosus (Asian bonytongue): 108920713
Help
Entry
108920713 CDS
T04919
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108920713 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108920713 (rapgef4)
Membrane trafficking [BR:
sfm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108920713 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
108920713
NCBI-ProteinID:
XP_018585193
LinkDB
All DBs
Position
12:16014762..16051426
Genome browser
AA seq
1031 aa
AA seq
DB search
MISAKMVAAHTAAHSSAAAEWIVCLDKRPSERSGEDVDIILARLKDVKAFEKFHPNLLQQ
ICLCGFYEYLDKGVTLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTRECSELLRVEQREFKTLWEKYRQCMAGLLAPPYGVMESGLNSDRM
PDKENMNKSVIGSLPNKARWRRSALMSSSNPSGSLPQVPSEKVMRAGKVLRHAILSKAPH
MIRDRKFHLKTYRQCCVGTELVDWLSQQSPSVHSRVQAVGMWQVLLEEGVLNHVDQELNF
QDKYLFYRFLDDEQEDAPPPNEEEEKKEGEEELQDTLLLLSQSGPDAHMRMILRKLPGQR
TLDDLEIIYEELLHIQALSHLSTSVKRELAGVLIFEAHAKAGTVLFNQGEEGTSWYIILK
GSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRD
VEANTVRLKEHQQDVLVLEKSPSSGRTSNQSGTSSHYKYNVMSGTPEKILEHFLETMRLD
SHFAESDPALDDFVLMHCVFFPCSKLCPVLMAHYNARASQGSEQERLDFALNNKRRVVRL
VLRWVSVHGAHLQEEEASLAFLEELYMSVSDDSRVIPALKEQLPEVEKVVKHYSDDAKSP
QKKQKVLLRQFSVGEERLQKQQPIRSSDEILLKVYCLDHTYTTIRVPMVAATQDVIAGAA
DKLGSAEDLLLVALSSAGDKVLLKPNDISFFFTLGINGRLFVCPRDQLDSLTPLPEQEGP
TTGSIASLELMSSRDLAYHMTVYDWELFNCVHEHELIFHTFGRQNFRKTTANLDLFLRRF
NELQLWVITEVCLCGQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIIMGMSNPAVSRLSQ
TWERLPSKFKKFFAEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKT
FIDSLVNFEKMRMIAKTVRIVRYCRSQPFNLEANQASKNHQEVRSYVRQLNVIDNQRTLS
QLSHKLEPRRT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcgaagatggtggcggctcacacggcagcgcactcttctgcggccgccgag
tggatcgtgtgcctcgacaagaggccttcagaacgatctggagaagatgtggacatcata
cttgctcgtctaaaggacgtcaaggcgtttgagaagttccatccaaaccttcttcagcaa
atctgcctgtgtggattctacgagtacctggataagggggttaccttgtatcgtcaggga
gacattggaacgagctggtacgcggttctttccggttctctcgatgtgaaggtgtccgag
acggcaaaccatcaggatgccgtgacgatctgcacgctggggattgggacggcgttcggc
gagtccatcctggacaacacgcctcgacatgcgaccatcgtcacccgtgagtgcagcgaa
ctcctccgggtcgagcagagggagttcaagaccctctgggagaagtaccgtcagtgcatg
gctggactcctagccccaccatatggagttatggaaagtgggctcaacagtgacagaatg
ccagataaagagaatatgaataagagtgttatagggtcattgcctaacaaggcccgctgg
cgccgttcggcactcatgtcctcctccaacccctcggggtctctaccgcaggttccctca
gaaaaggtcatgagggcgggaaaggtgctacgtcacgcgatcctctccaaggcgccgcac
atgatccgagacaggaagtttcacctcaagacgtacaggcagtgctgcgtgggcaccgag
ctggtggactggctgtcccagcagagcccctctgtccactcgcgcgtgcaggccgtgggc
atgtggcaggtgctgctggaggaaggcgtcctcaaccacgttgaccaggagctcaacttc
caggacaagtacctgttttaccgcttcctggacgacgagcaggaggacgcgcctccgccc
aacgaggaggaggagaagaaggagggcgaggaggagctgcaagacaccctcttactcctc
tcccagtcgggtcctgatgcccacatgcgaatgatcctacggaaactgcctggccagaga
acattggatgatttagaaattatatatgaagagcttctccacatacaggcgttgtcgcac
ctgtctacgtccgtgaaacgcgaactggccggggtgctcatctttgaagctcatgccaaa
gcgggaacagtgttgtttaatcagggtgaagaggggacctcgtggtacatcatcctgaag
ggctctgtcaacgttgtcatatatggcaagggtgtcgtgtgcaccctgcatgagggcgat
gacttcgggaagctggccctggtgaatgatgctccgcgcgccgcctccattgtcctgcgg
gaggacaactgccacttcctgcgggtagacaaagaagacttcaaccgcatcctgagggat
gtagaggctaatacagtgcgtctgaaagagcatcaacaggatgttctggtcctggagaag
agtccaagcagtggtcgcacctctaaccagagcggcacatcctcccactacaaatacaat
gtgatgtcaggaaccccagagaagattctggaacatttcctcgaaaccatgcggctggat
tcacacttcgccgaatcagacccggcgctggacgactttgtgctcatgcactgcgtgttc
ttcccttgcagcaagctgtgccccgtgctcatggctcactacaatgcccgggcatcccag
ggctcggagcaggagaggctcgactttgccctcaacaacaagcggcgggtggtgcgcttg
gtgttgcgctgggtctctgtgcacggggcccatctccaggaggaggaggcctcgctggct
ttcctcgaggagctctacatgtcggtgtccgacgattccagggtgatcccagccctgaag
gagcagctcccagaagtggagaaggttgtcaagcactactcagatgatgccaaatcacca
caaaaaaagcagaaagtgctactgcggcagttcagtgtgggggaggagaggctgcagaag
cagcagccaatcaggagcagcgatgaaatcctgctgaaagtgtactgcttggatcacact
tacaccacgattcgggtgccgatggtggccgcgacgcaggacgtgatcgccggtgccgcg
gacaaactggggtcggcggaggacctgctgctggttgcgctcagctcggccggagacaag
gtgctgttgaagcccaacgacatttcattctttttcacccttggcatcaacggacgcctg
tttgtgtgcccaagggaccagctggattcactgactccactaccagagcaagaaggaccc
accactggctccattgcaagccttgagctgatgagttccagagacttggcgtaccacatg
accgtctacgactgggagctcttcaactgtgtgcatgagcacgagctcatattccacaca
ttcggacggcagaacttcaggaagaccacagccaacctggacctgtttctccggcgattc
aacgagcttcagctatgggtcatcactgaagtgtgcctatgtggccagctgagcaagagg
gtgcagctgctcaagaagttcatcaagattgccgctcactgcaaggagtacaagaacctg
aactccttctttgccatcatcatggggatgagcaaccctgctgtaagcagactgagccag
acatgggagagacttcccagcaagttcaagaagttttttgcggagtttgaaagtttaatg
gacccttcccgcaaccatcgggcttacaggctcacagtggccaagctggaccctcccata
atccctttcatgccactcctcattaaagatatgacatttacccatgaaggaaacaagaca
tttattgacagtttggtcaattttgaaaaaatgcgaatgattgccaaaacagtcaggata
gtgaggtactgccgaagccagccattcaatctagaggctaaccaggctagcaagaatcac
caggaggtgcggagctatgtgcggcagctgaatgtgattgacaaccagaggaccctatcg
cagctctcccataaactggagcctcgcaggacttag
DBGET
integrated database retrieval system
