KEGG   Scleropages formosus (Asian bonytongue): 108920826
Entry
108920826         CDS       T04919                                 
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04010  MAPK signaling pathway
sfm04210  Apoptosis
sfm04218  Cellular senescence
sfm04620  Toll-like receptor signaling pathway
sfm04621  NOD-like receptor signaling pathway
sfm04622  RIG-I-like receptor signaling pathway
sfm04623  Cytosolic DNA-sensing pathway
sfm04625  C-type lectin receptor signaling pathway
sfm04920  Adipocytokine signaling pathway
sfm05132  Salmonella infection
sfm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108920826 (nfkb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108920826 (nfkb1)
   04218 Cellular senescence
    108920826 (nfkb1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108920826 (nfkb1)
   04621 NOD-like receptor signaling pathway
    108920826 (nfkb1)
   04622 RIG-I-like receptor signaling pathway
    108920826 (nfkb1)
   04623 Cytosolic DNA-sensing pathway
    108920826 (nfkb1)
   04625 C-type lectin receptor signaling pathway
    108920826 (nfkb1)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    108920826 (nfkb1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108920826 (nfkb1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108920826 (nfkb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfm03000]
    108920826 (nfkb1)
Transcription factors [BR:sfm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    108920826 (nfkb1)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_4 Ank_3 Ank_5 Death
Other DBs
NCBI-GeneID: 108920826
NCBI-ProteinID: XP_029103128
LinkDB
Position
21:22303484..22322860
AA seq 964 aa
MAEDDSYLQAHFLDMDTFAPWMGMETMNNFSSVSHATSARIVAVDGPYLQIVEQPKQRGF
RFRYGCEGPSHGGLPGASSERNRRSYPQVKICNYQGPARVVVQLVTSSAEPHFHAHSLVG
KQCEKGVCIADLPPKDTSISFPNLGILHVTKKNVSKTLEERMTEAFRMGYNYGVAIHPEI
DCLQGEVRIPREFTEQQKSLISSAAVNQAKEMDLSVVRLMFTAFLPDSDGGYSRRLDPVI
SEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDTGQVWE
AYGDFSPTDVHRQFAIVFKTPKYRNLNLQKPISVFVQLKRKSDNETSEPKPFTYHPQVID
KEEVQRKRQKTLPNFQDYGPAGGSGGMFRGGAGGGGGPAAGAGPGTGAGPSYYQGYGYGT
GSYGSGYSFSQGSGGTGMKHASQGPSGDDDGSGPGGDDDSEDDAPGAGGAACLRGPPAAD
EEERRETETPLAEPERADGPEGDSSMCALQDGLLETARRQAQALFHYAMSGDVRMLLALQ
RPLMTSQDEDGDTCLHLGVIHSRTTALCGLAQVISALPGEDVVNMRNDLYQTPLHLAVVT
QQEEAVTALLEAGADATLADRHGNTALHLAAQQSDGRMAALLLQHPQMVKLIEQPNATGL
CPIHLAVQASSLGALRELLSGGAHVEAQELSSGRTALHLATERDDVSLAGCLLLEGNAHV
DSCTYDGSTPLHVAAGRGSVKLSALLMAAGADPHKENCEPLYDTEEDRCPPGEDEEGEED
EGFIPGTTPLDIAPCTEVYDILNGKRYQPSAAVAAVPPQGDMKRLGEDTRRALCHALEQP
TSTWEGLAQALGLGVLNSAFRLSASPAHTLLDSYEVSGGTLKELEEALRLLGSASALDIL
QGALVEAVPSSGTAEELAAAALDVLDLKDRGAEDGGICDSGVETSYMKSGLSLSGSLCGP
PGSS
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcggaagacgactcgtacctgcaggcgcactttctagatatggatacttttgcacct
tggatgggaatggagaccatgaacaacttctcatcggtgtcgcacgccacctcggcacgg
atcgttgcagtagatggaccttatctccagattgtggagcagcccaaacagagggggttc
cgcttccgctacggctgcgaggggccgtcccatggggggctcccgggagcttccagcgaa
aggaacaggaggtcgtatcctcaggtgaagatttgtaactaccaggggccggcgcgagtc
gtggtacagctggtgacctcctccgcagagccacacttccacgcgcacagcctggtgggc
aagcagtgcgagaagggcgtctgcatcgctgacctgccgcccaaagacaccagcattagc
ttccccaacttgggcatcctccacgtgacaaagaagaacgtgagcaaaaccctggaggag
cggatgacggaggcctttcggatgggctacaactacggcgtggccattcacccagagata
gactgcctgcagggggaggttcgcatcccacgggaattcacagagcaacagaagagtctg
atcagcagcgcggccgtgaaccaggccaaggagatggacctgagcgtggtgcggctcatg
ttcaccgccttcctgccggacagcgacggcggctacagccgccggctggaccccgtcatc
tcggagcccatctacgacagcaaagcgcccaatgcctcaaacctgaagatcgtgaggatg
gaccgcacggcgggctgcgtgacaggcggcgaggaggtctacctgctgtgcgacaaggtg
caaaaagatgacatccaggtgcgcttttacgaggaagacgacacgggccaggtgtgggag
gcctacggggacttctcccccaccgatgtgcacaggcagtttgcaatcgtgttcaagacg
cccaagtaccggaacctgaacctgcagaagcccatctcggtgtttgtccagctgaagcgg
aagtcggacaacgagacgagcgagccgaagccgttcacgtaccacccgcaggtgatcgac
aaggaggaggtgcagcgcaagaggcagaaaactctgcccaatttccaggactacgggccg
gcgggaggaagcggtggcatgttcaggggcggagcgggaggaggaggaggcccggccgcc
ggagcaggtcctggcacgggagcaggcccctcctactatcagggctacggctacgggacg
ggcagctatggcagcggctactccttctcccagggcagcggcggcaccgggatgaaacac
gcctcccagggcccgagcggcgacgacgacggcagcggccccggcggtgatgatgacagt
gaggacgatgcccctggggccgggggggccgcgtgcctccgtggtccgcctgcggcggat
gaggaggagagacgggagacggagacccctttggccgaacccgagcgagcggatggcccg
gagggggactcgagcatgtgcgcgctgcaggacgggctgctggaaacggcccggcgacaa
gcccaggccctctttcactatgccatgagtggggatgtgcgcatgctgctggccctgcag
cgtcccctgatgaccagccaggacgaggacggagacacttgcctgcacctgggggtcatc
cacagccgcacgacggcgctatgcggtctggcccaggtcatctccgccctgcccggggag
gacgtggtgaacatgaggaacgacctctaccagacgccgctgcacctggccgtggtcacg
cagcaggaggaggcggtgaccgcgctgctcgaggccggggccgacgccaccctcgccgac
cgccacggcaacacggcgctgcacctggccgcgcagcagagcgacggcaggatggcggcg
ctgctcctgcagcacccacagatggtcaagctcatagagcaacccaatgccacggggctg
tgccccatccacctagccgtacaggccagcagcctgggcgctctccgagagctcctctcc
ggcggtgcccacgtcgaggcgcaggagctgagcagcggacgcacggccttgcacctggcc
accgagcgggacgatgtgtcgctggccggctgcctgctgctcgagggcaacgcgcacgtg
gactcttgcacctacgacggctccactccgctgcacgtcgctgctggacgcggctccgtc
aagctgagcgctctcctgatggctgcaggggccgacccgcacaaggagaactgtgagccg
ctgtacgacaccgaggaggaccggtgtccaccgggggaggatgaggagggcgaggaggac
gaaggcttcatcccagggaccacaccgctggatatagcgccgtgcacggaggtgtacgac
attctgaacggcaaacggtaccagcctagcgccgcggtggctgcagttcctcctcaaggg
gacatgaagagattgggggaggacacgagacgtgcgctgtgccacgccctggagcagccc
acctcgacatgggagggtctggcgcaggcgctggggctcggtgtgctcaacagcgccttc
cggttgagcgcgtcccccgcgcacacgctgctggacagctatgaggtgtcgggcggcacg
ctcaaagagctggaggaggccctgagactcctggggagcgcctctgccttggacatcctg
cagggggcgctagtcgaggctgtgccttcgtcgggcacagcggaagagctggcagcggcc
gccttggacgtgctggacctgaaggacaggggggcggaggacggcggcatctgcgacagc
ggcgtcgagacgtcctacatgaagtctggcctcagcctctccgggtcgctgtgcggccca
cccggctcgtcttag

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