Scleropages formosus (Asian bonytongue): 108925189
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Entry
108925189 CDS
T04919
Symbol
ift172
Name
(RefSeq) intraflagellar transport protein 172 homolog isoform X1
KO
K19676
intraflagellar transport protein 172
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfm03037
]
108925189 (ift172)
Cilium and associated proteins [BR:
sfm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
108925189 (ift172)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Clathrin
ANAPC3
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
108925189
NCBI-ProteinID:
XP_018592501
UniProt:
A0A8C9VLW6
LinkDB
All DBs
Position
1:47816715..47848994
Genome browser
AA seq
1749 aa
AA seq
DB search
MQLKHLKTLLTPQDGAAKVTCMAWAPNNGKFAVCTVDRVVLLYDEQGERRDKFSTKPADA
KYGKKSYVVKSMAFSPDSTKIAIAQTDNIIYVYKIGEEWGDKKVICNKFVQTSAVTCLLW
PAEYAIIFGLAEGKIRLANTKTNKSSTLYGTESYVVSLASNVSGKGVLSGHADGTLVRYF
FDDEGSGESQGKLLTHACPPYALAWGANSIIVAGCDKKIVAYGKEGQVMQTFDYSRDHSE
KEFTVAATSPSGQSVVIASYNRLRVFNWSPRRSSWDEATPKEIPNLYTITALSWKRDGSR
LCAGTLCGGVEQFDCCLRRSIYKNKFEMTYVGLSQVIVKNLSTGTRVVLKSHYGYEIDEV
KIMGRDRYLVAHTSDTLLLGDLGSNKLSEVAWQGSGGNEKFFFENETVCMIFNAGELTLV
EYGNNEILGSVRTEFMNPHLISVRLNERKQKGVEDNKKLAYLIDIKTIAIVDLAGGFNLG
TVAHDSRIDWLELNETGRKLLFRDKKLRLHLYDIESAAKTSVLSFCSYVQWVPGSDVVVA
QNRGNLCVWYNIDSPERVTMFPLRGDIVDLERANGKTEVVVTEGVNTVSYTLDEGLIEFG
TAIDDEDYYRATAFLETLEMSAETEAMWRTLSRLSLEARQLHIAERCFAALGDVSKARFL
NETNRIADQVSKEYVGDGTEHYRVKARLAMLDKSYKLAEMYFLEQNAVDEVMEMYQELHM
WDECIAVAETKGHPELDNLRRSYYQWLMETNQDEKAGEVKESAGDLQGAINLYLRAGLPA
KAARLAMSHDELISNADLVNRIASTLLKGEFYEMAGDLFEKIRNNQRALDCYRKGNAFRK
AVELARVAFPSDVVRLEEAWGDYLVQQKQMDAAINHYIEAGCSSKAIEAAIGARQWKKAI
HILELQEDQSSGMYYLKIAQHYASVQEYEVAERLYVKGGHIRDAIEMFTQAGLWEQAHKL
AVKCMSREDVTALYVSRAQELEKDGKFKEAERLFAAVEEPDLAITMYKKNKLYDDMIRLV
AKHHADLLTDTHLHLAKELEAESRFQEAEHHYIEGQDWKAAIIMYRANDMWEDAYRVAKA
RGGANTHKQVAYLWAKSLGGEAAVKLLNKFGLLETAIDFAADSCAFDFAFDLARLSMKNK
IPYVHMKHAMYLEDEGKFSEAETEFIKAGKPKEAVQMYVHNQDWASAQRVAEAHDPDSMM
EVLVGQAKFCVEQKDYQKAESLLLRAQRPELAIKYYREAEMWSDAMRICKEYVPNKLTVL
QEEYEKEVMKKGCRGVEGLVEQAREWEQSGEYARAVECYLKVKDASNPTLAEKCWMKAAE
LAIKFLAQEKAVDVVQAVGPRLVQLQKYSAAAELYLNLDLIKEAIDVFIEGEEWNKAKRV
AKELDPRFEDYVDQRYKDHLKNQGKVESLVGVDVMAALDMYAERGQWEKCIETASKQNFK
VLHKYLALYATHLIKEGETEKVLSLYTQHGVPANSQNFNIYKRLVQGLLDLPDKDCAEAY
RMWADLRDVLQQLCENLVKSSDANSPVHEEFEQMLLIAHYHATRSAARGMDQLNAVAAKL
SISLLRHTELIPADKAFYEAGLAAKETGWENMAFIFLNRFLDLSDGIDEGNLDALDHTDF
QDTDIPFEVPLPAKQHVPESKREEIRDWVLMVSMDQRVDQVLPRDERDAYEASLVAPSTG
IRSLPCIVTGYPVLRNKIEFKRPGKAANKDDWNKFLMATKTTHSPECQDVLKFVSQWCGG
LPSAGFSFH
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaacacctgaagactcttctaactcctcaggatggagccgcgaaggtcacc
tgcatggcatgggcccccaacaatggcaagttcgcggtgtgcaccgtggacagggtcgtg
ctgctctacgatgaacaaggcgagaggagggacaagttctcgacgaaacccgccgacgcc
aagtatgggaagaagagctatgtcgtcaaatccatggcgttctccccagactcgacgaaa
attgccattgcgcaaactgacaacattatctatgtttacaaaattggagaagagtggggt
gataaaaaagtaatttgcaataagtttgtgcagacaagtgctgtgacatgtttgttgtgg
cctgcggaatacgctatcatctttggactggctgagggaaagattcggcttgcgaacacc
aaaacaaacaagtcttccacgttatatgggacagagtcctacgttgtgtctctggcatcc
aatgtctctgggaaaggtgtgctgtcaggccatgctgatggaacactagtgcgctatttc
tttgacgacgagggctctggtgaatctcagggtaagttgctgacccatgcgtgcccaccc
tacgccctggcatggggtgctaacagcatcattgtggctggctgtgacaaaaagattgtg
gcctatgggaaggagggtcaagttatgcagacgttcgactacagtcgagatcactcggag
aaggagttcactgtggcagccaccagccccagcggccagtctgtggtcatcgccagctac
aaccggctgcgagtgttcaactggagccctcgtcggagctcctgggacgaagctaccccg
aaggagatccccaacctgtacaccatcactgccctttcctggaagagggacggatcgcga
ctctgtgcgggcacgttgtgcggcggagtggagcagttcgactgctgtctgcgcaggagc
atctacaagaataaatttgagatgacatacgtaggcctcagtcaggtgatagtgaagaac
ttgtccacaggcactcgtgtggtgctcaaatcccactacgggtacgagatcgatgaggtg
aagatcatgggcagggaccgctacctggtggcgcacacctctgacacactgctgctggga
gacctcggctccaacaagctgagcgaggtggcttggcagggctccgggggaaatgagaaa
ttcttctttgaaaatgaaacggtgtgcatgatcttcaacgcgggggagctcactttggtg
gagtacggcaacaacgagatcctgggctctgtccgcaccgagttcatgaacccccatctc
atcagcgttcgcctcaacgagaggaagcagaaaggtgtcgaagacaacaaaaagctggcc
tatttgatagacatcaagaccatagccatcgtggacctggctggtggattcaacctgggc
accgtggctcacgactccagaattgactggctggagctaaacgagacggggcgcaagctg
ctcttccgagacaagaagctgcggctccacctgtatgacatcgaaagcgccgccaagacc
tcggtgctgagcttctgctcctacgtccagtgggtgccgggcagcgacgttgtggtggct
cagaaccgcggcaacctgtgcgtgtggtacaacatcgacagccctgagagggtcaccatg
ttccccctgcggggcgacatcgttgacctagaaagagccaacggtaaaacagaggtcgtg
gtgacggaaggtgtcaacacggtctcctacacgctggacgagggactcattgaatttgga
acggcgattgatgatgaagactactacagagctacagccttcctggaaacgctagaaatg
tcagcggagacggaggccatgtggcggacgctcagcagactgtccctggaggcccggcag
ctacacatcgcggagaggtgctttgctgccttgggcgacgtgtccaaagcacggttcctc
aacgagaccaaccgcatcgccgatcaagtgtccaaggaatacgttggggacgggacagag
cactatcgagttaaagctcgcctggcaatgctggataagagctataaactggcagagatg
tacttcctggagcagaatgcagttgatgaagtcatggagatgtaccaggagcttcacatg
tgggatgaatgtattgctgtggctgagaccaagggccatcctgaactggataacctgagg
cggagctactaccagtggttaatggagactaatcaggacgagaaggccggcgaggtcaag
gagagtgcaggggacctccagggtgcaatcaacctgtacctgcgggcaggacttcctgct
aaggccgcccggctggctatgagccatgatgaactcatctccaatgccgacctggtcaac
cgcatagcctccaccctcctgaagggggagttctacgagatggccggggacctgtttgag
aagatccggaacaatcagcgggccttggactgctaccgcaaggggaatgccttcaggaag
gctgtggagcttgctcgggttgctttcccatccgatgtagtgcggctggaggaggcctgg
ggcgactacctggtccagcagaagcaaatggatgccgccattaaccactacatcgaagcc
ggctgctcgtcaaaggcaattgaagcagccattggggctcgccagtggaagaaagcaatc
catattctggagttgcaggaggaccagtccagcgggatgtactacctgaagatagcgcag
cactacgcctccgtacaggagtatgaggtcgcagagcggctgtacgtcaaaggcggtcat
atcagagatgccattgagatgttcacccaggcaggcttgtgggagcaggctcataagctg
gcggtgaagtgcatgagccgagaggacgtgacagcactctacgtgagccgagcccaggag
cttgagaaggatggcaagttcaaggaggctgagaggctctttgctgcagtggaggagccc
gacttagccatcaccatgtacaagaagaacaagctgtacgatgacatgatccgccttgtc
gccaagcaccatgcggacctcctcacagacacacacctgcacttggcaaaggagctggag
gcggagtcccgctttcaggaggctgagcaccactatatagagggccaggactggaaggct
gccatcattatgtaccgggccaatgacatgtgggaagatgcctacagggtggcaaaggct
cgaggaggagccaacacccacaagcaggtggcctacctgtgggccaagagccttgggggt
gaagctgccgtcaagctgctcaacaagtttgggctgctggagacagccattgattttgca
gctgatagctgtgcctttgacttcgcttttgaccttgcacgactgtccatgaagaacaag
atcccatatgttcacatgaagcatgccatgtatcttgaagatgagggtaaattctcggaa
gcagagacagagtttatcaaggctgggaagcccaaagaggcagtacagatgtatgtccac
aaccaggactgggctagtgcccagagagtggcagaggcccatgaccctgacagtatgatg
gaagtgctagttggacaagccaagttctgcgtggagcagaaggactaccagaaggctgag
tccctcctgctgcgtgcccagcgaccagaacttgccatcaagtactacagggaagcagag
atgtggagcgacgccatgcgcatttgcaaggagtacgtcccaaacaagctcacagtcctt
caagaggagtatgagaaagaggtcatgaagaaggggtgccggggtgtggagggcctggtg
gagcaggcacgcgagtgggaacagtcaggcgagtacgccagggctgtggagtgctacctc
aaggtcaaggatgcctctaaccccacgctggcagagaagtgctggatgaaggcagctgag
ctggcaatcaaattcctggcccaggagaaggcggtagatgtggtccaggctgtggggccc
cggcttgtgcagctgcagaagtacagtgcggctgctgagctctatctaaacctggacctc
atcaaagaagctatagatgtcttcatcgagggcgaggagtggaacaaagccaaacgggtg
gccaaggagctggatcccaggtttgaggattacgtggatcagaggtacaaagaccatctg
aaaaatcagggcaaagtcgaatctctggtgggcgtggatgtaatggctgctcttgacatg
tatgcagagagaggccagtgggaaaaatgcattgaaacagcctcaaaacagaacttcaag
gtccttcataagtacctggctctgtatgccacacacctgatcaaggagggtgagactgag
aaggtcctgagcctctatacacagcacggagtgcccgccaactcgcagaacttcaacatc
tacaagcgactggtacagggtctgctggaccttccagacaaggactgcgctgaggcgtat
cgcatgtgggccgatctgcgtgatgtcctacagcagctgtgtgagaacctggtgaaatcg
tctgacgccaactcccctgtccacgaggagtttgagcagatgctgctcatcgctcactac
cacgccacacgctctgccgccagaggcatggaccagctgaacgcagtggctgccaagctg
tccatctctctgctacggcacacggagctcattccagcggacaaggccttctatgaggca
gggctggcggccaaggagactggttgggaaaacatggccttcatcttcctgaaccgtttc
ctggatttgagtgacgggattgacgaaggcaacctagacgccctggatcacacggacttc
caggacacggacatcccctttgaagtcccgcttccggccaaacagcacgtccccgaaagc
aagcgagaggagatccgtgactgggtgttgatggtgtccatggaccagcgtgtggaccag
gtgctgccccgcgatgagcgtgacgcatacgaggcctcgttagtggccccaagcacaggc
atccgctccttgccatgcatcgtcacaggctacccggtgctgcggaataaaatcgagttc
aaacgaccaggaaaggcagccaacaaggacgactggaataaattcctaatggcaacaaag
accactcacagccccgagtgccaggatgtgctcaagttcgtgagccagtggtgcggcggt
cttccctctgccggcttctccttccactga
DBGET
integrated database retrieval system
