Scleropages formosus (Asian bonytongue): 108927651
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Entry
108927651 CDS
T04919
Symbol
top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108927651 (top1mt)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108927651 (top1mt)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Topoisomerases
108927651 (top1mt)
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
ArAE_2_N
Exonuc_VII_L
DUF4407
Motif
Other DBs
NCBI-GeneID:
108927651
NCBI-ProteinID:
XP_029101952
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Position
19:4499614..4506024
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AA seq
610 aa
AA seq
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MSACSTWLVRGSLWLKVRRAGAALLSLPKAGDVRARARRAHGAALAQEPRWEEGRSQDGK
KWKTLEHKGPLFPPEYEPLPQDVSFYYNGKPLRLSIVAEEVATFYAKMLDHEYTSKEIFQ
KNFFTDWREEMTAEERDLICEFSKCDFGEMHRYFVEQSEKKKDMSKEEKEVLKEETKKLT
EEYGYCLLDGHKEKIGNFRVEPPGLFRGRGEHPKMGKLKKRILPEDIIINCSNDSKTPEP
PKGHKWKEVRHDDTVTWLASWVENVQGSIKYIMLNPSSKLKGEKDWQKYEIARKLKLKVE
TIRKEYERDWKSKEMKKRQKGVAVYFIDKLALRAGNEKEEGETADTVGCCSLRVEHITLH
KELDGQECVVEFDFLGKDSIRYYNKVPVDKRVFKNLKLFMENKNPEDDLFDRINTTYLNK
TLNNSMTGLTAKVFRTYNASTTLQEQLSKLTSPNMTLEEKLLSYNRANRAVAILCNHQRT
APKTFEKSMQNLQQKIELKQKQLDEAKAELKKAKSDYRESKTEKLKRLVEQKEKMVKRLQ
EQLKKLQLQMTDREENKVIALGTSKLNYLDPRISVAWCKKFDVPIEKIYNKTQRDKFAWA
IDMTNEDFEF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtgttccacgtggctcgtgcgcggcagcctttggctgaaagttcgccgagcc
ggagccgctttgctctcgctgccgaaagccggcgacgtgcgggcacgcgcgcggcgcgca
cacggcgcagctctggcgcaggagcccaggtgggaagaaggacggtctcaggatggcaaa
aaatggaaaaccctggaacacaaaggtccccttttcccaccagaatacgaacccctaccc
caggacgtgtctttctattacaatggaaagccactcaggctcagcatagttgcagaggag
gtggccaccttctatgccaagatgctggaccatgagtacaccagtaaggagatatttcag
aagaacttctttacagattggcgtgaggaaatgacagctgaggaacgtgatcttatctgt
gagttctccaagtgtgactttggcgagatgcacagatactttgtggagcagtctgaaaag
aagaaagacatgtcaaaggaagaaaaggaggtgctcaaagaggagacaaagaagctgacg
gaggagtatggttactgccttttggatggccacaaggagaaaataggaaacttccgggtg
gaaccaccaggactgtttcgtggacgaggcgaacaccctaagatgggcaagctgaagaaa
aggattcttccggaggatatcatcatcaactgcagcaatgattcaaaaaccccagagccc
ccaaagggccacaagtggaaggaagtccggcatgatgatactgtaacctggttggcttcc
tgggtggagaatgtgcagggaagcataaagtacataatgcttaatcccagttccaaactg
aagggagaaaaagactggcaaaagtatgaaatcgctcgtaagctcaagcttaaagtggaa
acaattagaaaggagtatgagagagactggaagtccaaggaaatgaagaagagacaaaaa
ggggttgctgtgtacttcatagacaagctggccctgcgggcgggtaatgagaaggaggag
ggcgagacggccgacacagttggctgctgctcgctgcgcgtggagcacatcaccttgcac
aaagaactggatgggcaggagtgtgtggtggagtttgacttcctgggcaaggactcaatt
cgttactacaacaaggtcccagtggataagagggttttcaaaaatttaaagctcttcatg
gaaaacaagaacccagaagatgacttgtttgacagaatcaataccacctatttaaacaag
accttgaataactccatgacgggcttgacagccaaagtgtttcggacctacaacgcttcc
acaacgcttcaggagcagctcagcaaactcacctcacccaatatgacactggaggagaaa
ctgctctcttacaatcgggcaaacagagctgtggccattctctgtaaccatcagaggaca
gcgccaaaaacctttgagaagtccatgcagaaccttcagcagaagattgaactgaagcag
aagcagctggatgaagcaaaggcggagcttaagaaggcaaagagtgattaccgtgaatct
aaaactgaaaaactgaaaagacttgtggagcagaaggagaagatggtgaagaggttgcag
gagcaactgaagaaactgcagctccagatgacagacagggaggagaacaaggtcattgct
ctgggcacctccaaactcaactaccttgaccccaggatctctgtggcctggtgtaaaaaa
tttgatgttccaattgagaagatttacaacaaaacccaaagggacaagtttgcttgggcc
attgatatgaccaatgaggattttgagttctag
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